Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   EES41_RS17045 Genome accession   NZ_CP033581
Coordinates   3896599..3897219 (+) Length   206 a.a.
NCBI ID   WP_037797821.1    Uniprot ID   A0ABZ1RN32
Organism   Streptomyces sp. ADI95-16     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3891599..3902219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EES41_RS17020 (EES41_17055) - 3891873..3892448 (+) 576 WP_008743624.1 TerD family protein -
  EES41_RS17025 (EES41_17060) - 3892508..3893017 (+) 510 WP_123079337.1 N-acetyltransferase -
  EES41_RS17030 (EES41_17065) - 3893077..3894507 (-) 1431 WP_254211475.1 M1 family metallopeptidase -
  EES41_RS17035 (EES41_17070) - 3894602..3895159 (-) 558 WP_123079339.1 heme-binding protein -
  EES41_RS17040 (EES41_17075) - 3895433..3896602 (+) 1170 WP_037797819.1 sensor histidine kinase -
  EES41_RS17045 (EES41_17080) vraR 3896599..3897219 (+) 621 WP_037797821.1 response regulator transcription factor Regulator
  EES41_RS17050 (EES41_17085) - 3897705..3898208 (+) 504 WP_037797822.1 hypothetical protein -
  EES41_RS17055 (EES41_17090) - 3898267..3898941 (-) 675 WP_123082528.1 pentapeptide repeat-containing protein -
  EES41_RS17060 (EES41_17095) - 3899047..3900039 (+) 993 WP_123082529.1 zinc-binding dehydrogenase -
  EES41_RS17065 (EES41_17100) - 3900139..3901518 (+) 1380 WP_123079343.1 FAD-binding oxidoreductase -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 21743.05 Da        Isoelectric Point: 5.6407

>NTDB_id=283605 EES41_RS17045 WP_037797821.1 3896599..3897219(+) (vraR) [Streptomyces sp. ADI95-16]
MTTILLCDDHVVVRAGLLALLGSEPDIEVLGEAGSGEEAVALAAKLRPDVVLMDLQLGEGIDGVEATRRITALPAPPHVL
VLTTYDTDADITRAIGAGATGYLLKAERPEELFAAIHSAAAGRTTLSPPVASRVMAHMRGSRPTLTDRELDILGQLARGL
GNRDIARALFISEATVKTHLGRIYDKLGVDTRAGAVSVAKEQRLLP

Nucleotide


Download         Length: 621 bp        

>NTDB_id=283605 EES41_RS17045 WP_037797821.1 3896599..3897219(+) (vraR) [Streptomyces sp. ADI95-16]
ATGACGACGATCCTGCTCTGCGACGACCACGTGGTCGTCCGCGCCGGCCTGCTGGCCCTGCTGGGCAGCGAACCGGACAT
CGAGGTCCTCGGCGAGGCCGGCAGCGGCGAGGAGGCCGTGGCGCTGGCCGCGAAACTCCGACCCGACGTCGTCCTGATGG
ACCTCCAGCTGGGCGAGGGCATCGACGGCGTCGAAGCCACCCGCCGCATCACGGCCCTCCCCGCCCCGCCGCACGTCCTG
GTCCTGACCACCTACGACACCGACGCGGACATCACCCGGGCCATCGGCGCGGGCGCGACCGGATACCTCCTCAAGGCGGA
ACGCCCCGAGGAGCTCTTCGCTGCGATCCACTCGGCCGCCGCCGGCCGCACCACCCTCTCCCCACCCGTCGCCAGCCGCG
TCATGGCCCACATGCGCGGCAGCCGCCCCACCCTCACCGACCGCGAACTCGACATCCTCGGCCAACTGGCCCGCGGCCTC
GGCAACCGCGACATCGCCCGCGCCCTCTTCATCAGCGAGGCCACGGTCAAAACCCACCTGGGCCGCATCTACGACAAGCT
CGGCGTAGACACCCGCGCGGGCGCGGTCTCCGTAGCCAAAGAACAACGCCTCCTCCCCTAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(144-199)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

38.835

100

0.388
  degU Bacillus subtilis subsp. subtilis str. 168

35.484

100

0.374

Multiple sequence alignment