Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | EEL44_RS17365 | Genome accession | NZ_CP033515 |
| Coordinates | 2335248..2335973 (+) | Length | 241 a.a. |
| NCBI ID | WP_000877198.1 | Uniprot ID | Q9KU21 |
| Organism | Vibrio cholerae strain E4 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2330248..2340973
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL44_RS17350 (EEL44_17350) | clpC | 2330696..2333269 (-) | 2574 | WP_001235051.1 | ATP-dependent chaperone ClpB | Regulator |
| EEL44_RS17355 (EEL44_17355) | pgeF | 2333394..2334116 (-) | 723 | WP_000602844.1 | peptidoglycan editing factor PgeF | - |
| EEL44_RS17360 (EEL44_17360) | rluD | 2334119..2335093 (-) | 975 | WP_000941107.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| EEL44_RS17365 (EEL44_17365) | comL | 2335248..2335973 (+) | 726 | WP_000877198.1 | outer membrane protein assembly factor BamD | Machinery gene |
| EEL44_RS17370 (EEL44_17370) | raiA | 2336375..2336701 (+) | 327 | WP_000700176.1 | ribosome-associated translation inhibitor RaiA | - |
| EEL44_RS17375 (EEL44_17375) | pheA | 2336941..2338116 (+) | 1176 | WP_000130282.1 | prephenate dehydratase | - |
| EEL44_RS17380 (EEL44_17380) | - | 2338298..2339338 (+) | 1041 | WP_000595738.1 | PotD/PotF family extracellular solute-binding protein | - |
Sequence
Protein
Download Length: 241 a.a. Molecular weight: 27875.68 Da Isoelectric Point: 5.1660
>NTDB_id=283547 EEL44_RS17365 WP_000877198.1 2335248..2335973(+) (comL) [Vibrio cholerae strain E4]
MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKN
DDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAED
AQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLNP
L
MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKN
DDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAED
AQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLNP
L
Nucleotide
Download Length: 726 bp
>NTDB_id=283547 EEL44_RS17365 WP_000877198.1 2335248..2335973(+) (comL) [Vibrio cholerae strain E4]
ATGAAATACCAGACTTTATCAGGCCTACTCGCGTTATCCCTGTTATTTGGTTGCTCTAGCAGCCCAGATGTGGTGCCAGA
TGTACCGCCATCACAGCTGTACTCTGAAGCGCAAACCGCTCTACAAAGCGGAACGTGGTTAACCGCTATCGAAAAACTAG
AGGCGCTCGATTCACGCTATCCATTTGGTGCTTATTCAGAGCAAGTACAGCTCGATCTGATTTATGCCTACTACAAAAAT
GATGATCTGGCCCTTGGCCTCGCGACCATCGAACGTTTTACACGCCTTAATCCAACCCATGAAAAAATGGATTGGGTACT
CTACATGCGCGGTTTGACGCACATGGCGCAAGATCGCAACTTCATGCATGACCTGTTTAATATCGATCGCCGTGACCGCG
ATCCTGAACCCGTGAAAGCAGCCTTTGCGGATTTTAAGAAACTGCTCCAGCGTTACCCAAACAGCCCATACGCAGAAGAT
GCGCAGCGTCGAATGTTTGCGCTCAAGAACCGTTTAGCGGAATACGATTTAGCGACCGCAGATTTCTACCTGCGCCGTGA
AGCATGGATTGCAGCGATTAATCGCACTCAAGAGTTACAAAAAACCTATCCAGATACCGAAGCGGCACGTAAATCCTTAG
AAATACAACTCGAGGCTTATCAGCAGCTTGGTTTAACCGACGCGATAGAGCGAACTAAGCAGTTAATGCAGCTTAACCCT
TTATAA
ATGAAATACCAGACTTTATCAGGCCTACTCGCGTTATCCCTGTTATTTGGTTGCTCTAGCAGCCCAGATGTGGTGCCAGA
TGTACCGCCATCACAGCTGTACTCTGAAGCGCAAACCGCTCTACAAAGCGGAACGTGGTTAACCGCTATCGAAAAACTAG
AGGCGCTCGATTCACGCTATCCATTTGGTGCTTATTCAGAGCAAGTACAGCTCGATCTGATTTATGCCTACTACAAAAAT
GATGATCTGGCCCTTGGCCTCGCGACCATCGAACGTTTTACACGCCTTAATCCAACCCATGAAAAAATGGATTGGGTACT
CTACATGCGCGGTTTGACGCACATGGCGCAAGATCGCAACTTCATGCATGACCTGTTTAATATCGATCGCCGTGACCGCG
ATCCTGAACCCGTGAAAGCAGCCTTTGCGGATTTTAAGAAACTGCTCCAGCGTTACCCAAACAGCCCATACGCAGAAGAT
GCGCAGCGTCGAATGTTTGCGCTCAAGAACCGTTTAGCGGAATACGATTTAGCGACCGCAGATTTCTACCTGCGCCGTGA
AGCATGGATTGCAGCGATTAATCGCACTCAAGAGTTACAAAAAACCTATCCAGATACCGAAGCGGCACGTAAATCCTTAG
AAATACAACTCGAGGCTTATCAGCAGCTTGGTTTAACCGACGCGATAGAGCGAACTAAGCAGTTAATGCAGCTTAACCCT
TTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Neisseria meningitidis MC58 |
38.589 |
100 |
0.386 |
| comL | Neisseria gonorrhoeae MS11 |
37.759 |
100 |
0.378 |