Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C7M30_RS04490 Genome accession   NZ_CP028218
Coordinates   842946..844067 (-) Length   373 a.a.
NCBI ID   WP_250622414.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102756     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 837946..849067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS04465 (C7M30_00899) cwlQ 838084..838818 (+) 735 WP_250622412.1 bifunctional muramidase/murein lytic transglycosylase -
  C7M30_RS04470 (C7M30_00900) bhbI 839073..839471 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  C7M30_RS04475 (C7M30_00901) spxH 839468..840367 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  C7M30_RS04480 (C7M30_00902) - 840682..840849 (+) 168 WP_003244944.1 hypothetical protein -
  C7M30_RS04485 (C7M30_00903) pepF 840887..842716 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  C7M30_RS04490 (C7M30_00904) coiA 842946..844067 (-) 1122 WP_250622414.1 competence protein CoiA Machinery gene
  C7M30_RS04495 - 844141..844263 (+) 123 WP_021479547.1 hypothetical protein -
  C7M30_RS04500 (C7M30_00905) mecA 844258..844914 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  C7M30_RS04505 - 844881..845021 (-) 141 WP_119122854.1 hypothetical protein -
  C7M30_RS04510 (C7M30_00906) yjbE 845191..845847 (+) 657 WP_038828809.1 TerC family protein -
  C7M30_RS04515 (C7M30_00907) spx 845893..846288 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  C7M30_RS04520 (C7M30_00908) yjbC 846469..847047 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  C7M30_RS04525 (C7M30_00909) yjbB 847211..848428 (-) 1218 WP_160244995.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43729.70 Da        Isoelectric Point: 9.9420

>NTDB_id=283400 C7M30_RS04490 WP_250622414.1 842946..844067(-) (coiA) [Bacillus subtilis strain SRCM102756]
MFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
FIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKQQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFITDLGDKRAPIRFSAVLQQCKLHIYNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=283400 C7M30_RS04490 WP_250622414.1 842946..844067(-) (coiA) [Bacillus subtilis strain SRCM102756]
ATGTTCCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAATCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TTTATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGTGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCAGCAGACGCCTTTTTCTTTTCTGCCAACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGGTTTCTTTATTTGTTTATAACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTTATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.587

100

0.976


Multiple sequence alignment