Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M28_RS09755 Genome accession   NZ_CP028215
Coordinates   1864130..1864249 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102750     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1859130..1869249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS09735 (C7M28_01915) albG 1859293..1859994 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  C7M28_RS09740 (C7M28_01916) ywhL 1860000..1861376 (-) 1377 WP_046381401.1 YncE family protein -
  C7M28_RS09745 (C7M28_01917) ywhK 1861416..1862771 (-) 1356 WP_069704038.1 YncE family protein -
  C7M28_RS09750 (C7M28_01918) rapF 1863001..1864146 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  C7M28_RS09755 (C7M28_01919) phrF 1864130..1864249 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M28_RS09760 (C7M28_01920) ywhH 1864347..1864809 (+) 463 Protein_1933 YbaK/EbsC family protein -
  C7M28_RS09765 (C7M28_01921) speB 1864841..1865713 (-) 873 WP_003227545.1 agmatinase -
  C7M28_RS09770 (C7M28_01922) speE 1865774..1866604 (-) 831 WP_003227543.1 spermidine synthase -
  C7M28_RS09775 (C7M28_01923) pbpG 1866807..1868882 (+) 2076 WP_029726084.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=283264 C7M28_RS09755 WP_009968329.1 1864130..1864249(+) (phrF) [Bacillus subtilis strain SRCM102750]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=283264 C7M28_RS09755 WP_009968329.1 1864130..1864249(+) (phrF) [Bacillus subtilis strain SRCM102750]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment