Detailed information NTG0283196

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: C7M27_RS13000
• Genome accession: NZ_CP028213
• Coordinates: 2494835..2495788 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM102749
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2489835..2500788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M27_RS12970 (C7M27_02562)	appD	2489957..2490943 (-)	987	WP_049140721.1	oligopeptide ABC transporter ATP-binding protein AppD	-
C7M27_RS12975 (C7M27_02563)	yjaZ	2491135..2491920 (-)	786	WP_049140720.1	DUF2268 domain-containing protein	-
C7M27_RS12980 (C7M27_02564)	fabF	2491996..2493237 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
C7M27_RS12985 (C7M27_02565)	fabH	2493260..2494198 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
C7M27_RS12990 (C7M27_02566)	yjzB	2494363..2494599 (+)	237	WP_072173825.1	spore coat protein YjzB	-
C7M27_RS12995 (C7M27_02567)	comZ	2494629..2494820 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
C7M27_RS13000 (C7M27_02568)	med	2494835..2495788 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
C7M27_RS13005 (C7M27_02569)	-	2495879..2496436 (-)	558	WP_014476424.1	hypothetical protein	-
C7M27_RS13010 (C7M27_02570)	-	2496518..2497252 (-)	735	WP_049140719.1	hypothetical protein	-
C7M27_RS13015 (C7M27_02571)	yjzD	2497502..2497687 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
C7M27_RS13020 (C7M27_02572)	yjzC	2497733..2497912 (-)	180	WP_003245356.1	YjzC family protein	-
C7M27_RS13025 (C7M27_02573)	argF	2497998..2498957 (-)	960	WP_038828321.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=283196 C7M27_RS13000 WP_014476425.1 2494835..2495788(-) (med) [Bacillus subtilis strain SRCM102749]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=283196 C7M27_RS13000 WP_014476425.1 2494835..2495788(-) (med) [Bacillus subtilis strain SRCM102749]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTTTACGGTCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997