Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M27_RS12995 Genome accession   NZ_CP028213
Coordinates   2494629..2494820 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102749     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2489629..2499820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS12970 (C7M27_02562) appD 2489957..2490943 (-) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M27_RS12975 (C7M27_02563) yjaZ 2491135..2491920 (-) 786 WP_049140720.1 DUF2268 domain-containing protein -
  C7M27_RS12980 (C7M27_02564) fabF 2491996..2493237 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M27_RS12985 (C7M27_02565) fabH 2493260..2494198 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M27_RS12990 (C7M27_02566) yjzB 2494363..2494599 (+) 237 WP_072173825.1 spore coat protein YjzB -
  C7M27_RS12995 (C7M27_02567) comZ 2494629..2494820 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M27_RS13000 (C7M27_02568) med 2494835..2495788 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C7M27_RS13005 (C7M27_02569) - 2495879..2496436 (-) 558 WP_014476424.1 hypothetical protein -
  C7M27_RS13010 (C7M27_02570) - 2496518..2497252 (-) 735 WP_049140719.1 hypothetical protein -
  C7M27_RS13015 (C7M27_02571) yjzD 2497502..2497687 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C7M27_RS13020 (C7M27_02572) yjzC 2497733..2497912 (-) 180 WP_003245356.1 YjzC family protein -
  C7M27_RS13025 (C7M27_02573) argF 2497998..2498957 (-) 960 WP_038828321.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=283195 C7M27_RS12995 WP_003224559.1 2494629..2494820(-) (comZ) [Bacillus subtilis strain SRCM102749]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=283195 C7M27_RS12995 WP_003224559.1 2494629..2494820(-) (comZ) [Bacillus subtilis strain SRCM102749]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment