Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   C7M27_RS02290 Genome accession   NZ_CP028213
Coordinates   468699..468839 (+) Length   46 a.a.
NCBI ID   WP_003220708.1    Uniprot ID   G4P060
Organism   Bacillus subtilis strain SRCM102749     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 463699..473839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS02260 (C7M27_00450) yueI 463994..464392 (+) 399 WP_014480710.1 YueI family protein -
  C7M27_RS02265 (C7M27_00451) pncA 464489..465040 (+) 552 WP_128740689.1 isochorismatase family cysteine hydrolase -
  C7M27_RS02270 (C7M27_00452) pncB 465056..466528 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M27_RS02275 (C7M27_00453) pdeH 466665..467894 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C7M27_RS02280 (C7M27_00454) - 467870..468238 (-) 369 WP_116315920.1 hypothetical protein -
  C7M27_RS02285 - 468352..468477 (-) 126 WP_003228793.1 hypothetical protein -
  C7M27_RS02290 (C7M27_00455) degQ 468699..468839 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M27_RS02295 (C7M27_00456) - 469023..469883 (+) 861 WP_128740688.1 polyprenyl synthetase family protein -
  C7M27_RS02300 (C7M27_00457) comX 469896..470060 (+) 165 WP_015384519.1 competence pheromone ComX -
  C7M27_RS02305 (C7M27_00458) comP 470072..472372 (+) 2301 WP_088300729.1 histidine kinase Regulator
  C7M27_RS02310 (C7M27_00459) comA 472453..473097 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M27_RS02315 (C7M27_00460) yuxO 473116..473496 (+) 381 WP_003228810.1 hotdog fold thioesterase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5546.44 Da        Isoelectric Point: 6.2559

>NTDB_id=283153 C7M27_RS02290 WP_003220708.1 468699..468839(+) (degQ) [Bacillus subtilis strain SRCM102749]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283153 C7M27_RS02290 WP_003220708.1 468699..468839(+) (degQ) [Bacillus subtilis strain SRCM102749]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4P060

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment