Detailed information NTG0283100

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: C7M26_RS08405
• Genome accession: NZ_CP028212
• Coordinates: 1561238..1562191 (-)
• Length: 317 a.a.
• NCBI ID: WP_032721344.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102748
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1556238..1567191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M26_RS08375 (C7M26_01651)	appD	1556357..1557343 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
C7M26_RS08380 (C7M26_01652)	yjaZ	1557535..1558320 (-)	786	WP_032721346.1	DUF2268 domain-containing protein	-
C7M26_RS08385 (C7M26_01653)	fabF	1558396..1559637 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
C7M26_RS08390 (C7M26_01654)	fabH	1559660..1560598 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
C7M26_RS08395 (C7M26_01655)	yjzB	1560763..1561002 (+)	240	WP_003232972.1	spore coat protein YjzB	-
C7M26_RS08400 (C7M26_01656)	comZ	1561032..1561223 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
C7M26_RS08405 (C7M26_01657)	med	1561238..1562191 (-)	954	WP_032721344.1	transcriptional regulator Med	Regulator
C7M26_RS08410 (C7M26_01658)	-	1562281..1562838 (-)	558	WP_032721343.1	hypothetical protein	-
C7M26_RS08415 (C7M26_01659)	-	1562920..1563654 (-)	735	WP_032721340.1	hypothetical protein	-
C7M26_RS08420 (C7M26_01660)	yjzD	1563903..1564088 (+)	186	WP_029317607.1	DUF2929 domain-containing protein	-
C7M26_RS08425 (C7M26_01661)	yjzC	1564134..1564313 (-)	180	WP_003245356.1	YjzC family protein	-
C7M26_RS08430 (C7M26_01662)	argF	1564399..1565358 (-)	960	WP_032721338.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35323.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=283100 C7M26_RS08405 WP_032721344.1 1561238..1562191(-) (med) [Bacillus subtilis strain SRCM102748]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGNLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=283100 C7M26_RS08405 WP_032721344.1 1561238..1562191(-) (med) [Bacillus subtilis strain SRCM102748]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CAACCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994