Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M26_RS08400 Genome accession   NZ_CP028212
Coordinates   1561032..1561223 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102748     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1556032..1566223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS08375 (C7M26_01651) appD 1556357..1557343 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M26_RS08380 (C7M26_01652) yjaZ 1557535..1558320 (-) 786 WP_032721346.1 DUF2268 domain-containing protein -
  C7M26_RS08385 (C7M26_01653) fabF 1558396..1559637 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M26_RS08390 (C7M26_01654) fabH 1559660..1560598 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M26_RS08395 (C7M26_01655) yjzB 1560763..1561002 (+) 240 WP_003232972.1 spore coat protein YjzB -
  C7M26_RS08400 (C7M26_01656) comZ 1561032..1561223 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M26_RS08405 (C7M26_01657) med 1561238..1562191 (-) 954 WP_032721344.1 transcriptional regulator Med Regulator
  C7M26_RS08410 (C7M26_01658) - 1562281..1562838 (-) 558 WP_032721343.1 hypothetical protein -
  C7M26_RS08415 (C7M26_01659) - 1562920..1563654 (-) 735 WP_032721340.1 hypothetical protein -
  C7M26_RS08420 (C7M26_01660) yjzD 1563903..1564088 (+) 186 WP_029317607.1 DUF2929 domain-containing protein -
  C7M26_RS08425 (C7M26_01661) yjzC 1564134..1564313 (-) 180 WP_003245356.1 YjzC family protein -
  C7M26_RS08430 (C7M26_01662) argF 1564399..1565358 (-) 960 WP_032721338.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=283099 C7M26_RS08400 WP_003224559.1 1561032..1561223(-) (comZ) [Bacillus subtilis strain SRCM102748]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=283099 C7M26_RS08400 WP_003224559.1 1561032..1561223(-) (comZ) [Bacillus subtilis strain SRCM102748]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment