Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   EB817_RS02350 Genome accession   NZ_CP033336
Coordinates   434854..435888 (+) Length   344 a.a.
NCBI ID   WP_129304505.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 429854..440888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS02320 (EB817_02325) tsaE 430919..431380 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EB817_RS02325 (EB817_02330) - 431355..431879 (+) 525 WP_063811834.1 N-acetyltransferase -
  EB817_RS02330 (EB817_02335) - 431888..433171 (+) 1284 WP_030126322.1 LCP family protein -
  EB817_RS02335 (EB817_02340) - 433282..433638 (-) 357 WP_030126323.1 hypothetical protein -
  EB817_RS02340 (EB817_02345) - 433635..434054 (-) 420 WP_002983376.1 HIT family protein -
  EB817_RS02345 (EB817_02350) pptA 434126..434851 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EB817_RS02350 (EB817_02355) pptB 434854..435888 (+) 1035 WP_129304505.1 ABC transporter permease Regulator
  EB817_RS02355 (EB817_02360) - 435952..436743 (+) 792 WP_002983385.1 phosphotransferase family protein -
  EB817_RS02360 (EB817_02365) trmB 436743..437378 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EB817_RS02370 (EB817_02375) rimP 437637..438173 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  EB817_RS02375 (EB817_02380) nusA 438348..439505 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  EB817_RS02380 (EB817_02385) - 439521..439817 (+) 297 WP_002983486.1 YlxR family protein -
  EB817_RS02385 (EB817_02390) - 439810..440112 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40292.55 Da        Isoelectric Point: 10.3713

>NTDB_id=283068 EB817_RS02350 WP_129304505.1 434854..435888(+) (pptB) [Streptococcus pyogenes strain TSPY165]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWMSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=283068 EB817_RS02350 WP_129304505.1 434854..435888(+) (pptB) [Streptococcus pyogenes strain TSPY165]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGATGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment