Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | C7M25_RS12110 | Genome accession | NZ_CP028211 |
| Coordinates | 2377678..2378748 (+) | Length | 356 a.a. |
| NCBI ID | WP_043020785.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102747 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2372678..2383748
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M25_RS12080 (C7M25_02423) | - | 2373147..2373392 (-) | 246 | WP_003153078.1 | DUF2626 domain-containing protein | - |
| C7M25_RS12085 (C7M25_02424) | - | 2373629..2374009 (+) | 381 | WP_003153079.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| C7M25_RS12095 (C7M25_02426) | - | 2374216..2375046 (+) | 831 | WP_015240214.1 | STAS domain-containing protein | - |
| C7M25_RS12100 (C7M25_02427) | - | 2375084..2376385 (-) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| C7M25_RS12105 (C7M25_02428) | - | 2376531..2377481 (+) | 951 | WP_160223176.1 | magnesium transporter CorA family protein | - |
| C7M25_RS12110 (C7M25_02429) | comGA | 2377678..2378748 (+) | 1071 | WP_043020785.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C7M25_RS12115 (C7M25_02430) | comGB | 2378735..2379772 (+) | 1038 | WP_061582071.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C7M25_RS12120 (C7M25_02431) | comGC | 2379819..2380085 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C7M25_RS12125 (C7M25_02432) | comGD | 2380075..2380512 (+) | 438 | WP_012117983.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C7M25_RS12130 (C7M25_02433) | comGE | 2380496..2380810 (+) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| C7M25_RS12135 (C7M25_02434) | comGF | 2380719..2381219 (+) | 501 | WP_257474763.1 | competence type IV pilus minor pilin ComGF | - |
| C7M25_RS12140 (C7M25_02435) | comGG | 2381220..2381597 (+) | 378 | WP_160223175.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| C7M25_RS12145 (C7M25_02436) | - | 2381654..2381833 (+) | 180 | WP_160223174.1 | YqzE family protein | - |
| C7M25_RS12150 (C7M25_02437) | - | 2381873..2382202 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| C7M25_RS12155 (C7M25_02438) | tapA | 2382461..2383132 (+) | 672 | WP_160223173.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M25_RS12160 (C7M25_02439) | sipW | 2383104..2383688 (+) | 585 | WP_160223172.1 | signal peptidase I SipW | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40529.81 Da Isoelectric Point: 9.3485
>NTDB_id=283034 C7M25_RS12110 WP_043020785.1 2377678..2378748(+) (comGA) [Bacillus velezensis strain SRCM102747]
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTQRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTQRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
Nucleotide
Download Length: 1071 bp
>NTDB_id=283034 C7M25_RS12110 WP_043020785.1 2377678..2378748(+) (comGA) [Bacillus velezensis strain SRCM102747]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAGGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTAATTTCTCATTTTAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTAAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCCACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAAAGGCATTTCAACCGGCGTATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGGCACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTCGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACAACGTGCAGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATTGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAGGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTAATTTCTCATTTTAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTAAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCCACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAAAGGCATTTCAACCGGCGTATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGGCACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTCGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACAACGTGCAGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATTGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
82.022 |
100 |
0.82 |
| pilB | Glaesserella parasuis strain SC1401 |
38.793 |
97.753 |
0.379 |