Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   C7M25_RS09215 Genome accession   NZ_CP028211
Coordinates   1826379..1826519 (+) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain SRCM102747     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1821379..1831519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M25_RS09190 (C7M25_01845) - 1821683..1822081 (+) 399 WP_015240486.1 YueI family protein -
  C7M25_RS09195 (C7M25_01846) - 1822178..1822729 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  C7M25_RS09200 (C7M25_01847) - 1822747..1824213 (+) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  C7M25_RS09205 (C7M25_01848) - 1824343..1825566 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  C7M25_RS09210 (C7M25_01849) - 1825573..1825914 (-) 342 WP_069006914.1 hypothetical protein -
  C7M25_RS09215 (C7M25_01850) degQ 1826379..1826519 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  C7M25_RS09220 (C7M25_01851) - 1826671..1827582 (+) 912 WP_081111611.1 polyprenyl synthetase family protein -
  C7M25_RS09225 (C7M25_01852) comX 1827582..1827746 (+) 165 WP_061581461.1 competence pheromone ComX -
  C7M25_RS09230 (C7M25_01853) comP 1827758..1830049 (+) 2292 WP_160223246.1 histidine kinase Regulator
  C7M25_RS09235 (C7M25_01854) comA 1830130..1830774 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  C7M25_RS09240 (C7M25_01855) - 1830796..1831179 (+) 384 WP_012118312.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=283019 C7M25_RS09215 WP_003152043.1 1826379..1826519(+) (degQ) [Bacillus velezensis strain SRCM102747]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283019 C7M25_RS09215 WP_003152043.1 1826379..1826519(+) (degQ) [Bacillus velezensis strain SRCM102747]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891

Multiple sequence alignment