Detailed information NTG0282928

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M24_RS02575
• Genome accession: NZ_CP028210
• Coordinates: 513930..515078 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102746
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 508930..520078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M24_RS02555 (C7M24_00509)	-	509327..510010 (-)	684	WP_025284225.1	ABC transporter ATP-binding protein	-
C7M24_RS02560 (C7M24_00510)	-	510025..511461 (-)	1437	WP_160222846.1	ABC transporter permease	-
C7M24_RS02565 (C7M24_00511)	-	511674..512357 (+)	684	WP_007410267.1	response regulator transcription factor	-
C7M24_RS02570 (C7M24_00512)	-	512344..513777 (+)	1434	WP_162992601.1	sensor histidine kinase	-
C7M24_RS02575 (C7M24_00513)	rapC	513930..515078 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M24_RS02580 (C7M24_00514)	phrC	515062..515181 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M24_RS02585	-	515330..515440 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M24_RS02590 (C7M24_00516)	-	515520..516884 (-)	1365	WP_059366589.1	aspartate kinase	-
C7M24_RS02595 (C7M24_00517)	ceuB	517299..518252 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M24_RS02600 (C7M24_00518)	-	518242..519189 (+)	948	WP_160222847.1	iron chelate uptake ABC transporter family permease subunit	-
C7M24_RS02605 (C7M24_00519)	-	519183..519941 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282928 C7M24_RS02575 WP_007410270.1 513930..515078(+) (rapC) [Bacillus velezensis strain SRCM102746]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282928 C7M24_RS02575 WP_007410270.1 513930..515078(+) (rapC) [Bacillus velezensis strain SRCM102746]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568