Detailed information NTG0282906

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: C7M23_RS18275
• Genome accession: NZ_CP028209
• Coordinates: 3569914..3570867 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM102745
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3564914..3575867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M23_RS18245 (C7M23_03594)	appD	3565033..3566019 (-)	987	WP_131227309.1	oligopeptide ABC transporter ATP-binding protein AppD	-
C7M23_RS18250 (C7M23_03595)	yjaZ	3566211..3566996 (-)	786	WP_014479439.1	DUF2268 domain-containing protein	-
C7M23_RS18255 (C7M23_03596)	fabF	3567072..3568313 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
C7M23_RS18260 (C7M23_03597)	fabH	3568336..3569274 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
C7M23_RS18265 (C7M23_03598)	yjzB	3569439..3569678 (+)	240	WP_003232972.1	spore coat protein YjzB	-
C7M23_RS18270 (C7M23_03599)	comZ	3569708..3569899 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
C7M23_RS18275 (C7M23_03600)	med	3569914..3570867 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
C7M23_RS18280 (C7M23_03601)	-	3570957..3571514 (-)	558	WP_038428783.1	hypothetical protein	-
C7M23_RS18285 (C7M23_03602)	-	3571596..3572330 (-)	735	WP_033883595.1	hypothetical protein	-
C7M23_RS18290 (C7M23_03603)	yjzD	3572579..3572764 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
C7M23_RS18295 (C7M23_03604)	yjzC	3572811..3572990 (-)	180	WP_003245356.1	YjzC family protein	-
C7M23_RS18300 (C7M23_03605)	argF	3573076..3574035 (-)	960	WP_014476421.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=282906 C7M23_RS18275 WP_014476425.1 3569914..3570867(-) (med) [Bacillus subtilis strain SRCM102745]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=282906 C7M23_RS18275 WP_014476425.1 3569914..3570867(-) (med) [Bacillus subtilis strain SRCM102745]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997