Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M23_RS18270 Genome accession   NZ_CP028209
Coordinates   3569708..3569899 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102745     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3564708..3574899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS18245 (C7M23_03594) appD 3565033..3566019 (-) 987 WP_131227309.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M23_RS18250 (C7M23_03595) yjaZ 3566211..3566996 (-) 786 WP_014479439.1 DUF2268 domain-containing protein -
  C7M23_RS18255 (C7M23_03596) fabF 3567072..3568313 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M23_RS18260 (C7M23_03597) fabH 3568336..3569274 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M23_RS18265 (C7M23_03598) yjzB 3569439..3569678 (+) 240 WP_003232972.1 spore coat protein YjzB -
  C7M23_RS18270 (C7M23_03599) comZ 3569708..3569899 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M23_RS18275 (C7M23_03600) med 3569914..3570867 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C7M23_RS18280 (C7M23_03601) - 3570957..3571514 (-) 558 WP_038428783.1 hypothetical protein -
  C7M23_RS18285 (C7M23_03602) - 3571596..3572330 (-) 735 WP_033883595.1 hypothetical protein -
  C7M23_RS18290 (C7M23_03603) yjzD 3572579..3572764 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C7M23_RS18295 (C7M23_03604) yjzC 3572811..3572990 (-) 180 WP_003245356.1 YjzC family protein -
  C7M23_RS18300 (C7M23_03605) argF 3573076..3574035 (-) 960 WP_014476421.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=282905 C7M23_RS18270 WP_003224559.1 3569708..3569899(-) (comZ) [Bacillus subtilis strain SRCM102745]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=282905 C7M23_RS18270 WP_003224559.1 3569708..3569899(-) (comZ) [Bacillus subtilis strain SRCM102745]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment