Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C7M23_RS12090 | Genome accession | NZ_CP028209 |
| Coordinates | 2312501..2312836 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM102745 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2307501..2317836
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M23_RS12040 (C7M23_02356) | comGC | 2307519..2307815 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C7M23_RS12045 (C7M23_02357) | comGD | 2307805..2308236 (+) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| C7M23_RS12050 (C7M23_02358) | comGE | 2308220..2308567 (+) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| C7M23_RS12055 | comGF | 2308593..2308976 (+) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| C7M23_RS12060 (C7M23_02360) | comGG | 2308977..2309351 (+) | 375 | WP_029317914.1 | ComG operon protein ComGG | Machinery gene |
| C7M23_RS12065 (C7M23_02361) | spoIITA | 2309422..2309601 (+) | 180 | WP_072175549.1 | YqzE family protein | - |
| C7M23_RS12070 (C7M23_02362) | yqzG | 2309643..2309969 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| C7M23_RS12075 (C7M23_02363) | tapA | 2310241..2311002 (+) | 762 | WP_131227614.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M23_RS12080 (C7M23_02364) | sipW | 2310986..2311558 (+) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| C7M23_RS12085 (C7M23_02365) | tasA | 2311623..2312408 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| C7M23_RS12090 (C7M23_02366) | sinR | 2312501..2312836 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C7M23_RS12095 (C7M23_02367) | sinI | 2312870..2313043 (-) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| C7M23_RS12100 (C7M23_02368) | yqhG | 2313226..2314020 (-) | 795 | WP_003230200.1 | YqhG family protein | - |
| C7M23_RS12105 (C7M23_02369) | hepAA | 2314041..2315714 (-) | 1674 | WP_003230203.1 | SNF2-related protein | - |
| C7M23_RS12110 (C7M23_02370) | gcvT | 2316156..2317244 (+) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=282885 C7M23_RS12090 WP_003226345.1 2312501..2312836(-) (sinR) [Bacillus subtilis strain SRCM102745]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=282885 C7M23_RS12090 WP_003226345.1 2312501..2312836(-) (sinR) [Bacillus subtilis strain SRCM102745]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |