Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   C7M23_RS12095 Genome accession   NZ_CP028209
Coordinates   2312870..2313043 (-) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis strain SRCM102745     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 2307870..2318043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS12050 (C7M23_02358) comGE 2308220..2308567 (+) 348 WP_015714254.1 ComG operon protein 5 Machinery gene
  C7M23_RS12055 comGF 2308593..2308976 (+) 384 WP_029317913.1 ComG operon protein ComGF Machinery gene
  C7M23_RS12060 (C7M23_02360) comGG 2308977..2309351 (+) 375 WP_029317914.1 ComG operon protein ComGG Machinery gene
  C7M23_RS12065 (C7M23_02361) spoIITA 2309422..2309601 (+) 180 WP_072175549.1 YqzE family protein -
  C7M23_RS12070 (C7M23_02362) yqzG 2309643..2309969 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  C7M23_RS12075 (C7M23_02363) tapA 2310241..2311002 (+) 762 WP_131227614.1 amyloid fiber anchoring/assembly protein TapA -
  C7M23_RS12080 (C7M23_02364) sipW 2310986..2311558 (+) 573 WP_072692741.1 signal peptidase I SipW -
  C7M23_RS12085 (C7M23_02365) tasA 2311623..2312408 (+) 786 WP_014664586.1 biofilm matrix protein TasA -
  C7M23_RS12090 (C7M23_02366) sinR 2312501..2312836 (-) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  C7M23_RS12095 (C7M23_02367) sinI 2312870..2313043 (-) 174 WP_003230187.1 anti-repressor SinI Regulator
  C7M23_RS12100 (C7M23_02368) yqhG 2313226..2314020 (-) 795 WP_003230200.1 YqhG family protein -
  C7M23_RS12105 (C7M23_02369) hepAA 2314041..2315714 (-) 1674 WP_003230203.1 SNF2-related protein -
  C7M23_RS12110 (C7M23_02370) gcvT 2316156..2317244 (+) 1089 WP_015714248.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=282886 C7M23_RS12095 WP_003230187.1 2312870..2313043(-) (sinI) [Bacillus subtilis strain SRCM102745]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=282886 C7M23_RS12095 WP_003230187.1 2312870..2313043(-) (sinI) [Bacillus subtilis strain SRCM102745]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment