Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C7M23_RS08440 Genome accession   NZ_CP028209
Coordinates   1638594..1640894 (+) Length   766 a.a.
NCBI ID   WP_088300729.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1633594..1645894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS08410 (C7M23_01653) pdeH 1635186..1636415 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C7M23_RS08415 (C7M23_01654) - 1636391..1636759 (-) 369 WP_014477834.1 hypothetical protein -
  C7M23_RS08420 - 1636873..1636998 (-) 126 WP_003228793.1 hypothetical protein -
  C7M23_RS08425 (C7M23_01655) degQ 1637220..1637360 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M23_RS08430 (C7M23_01656) - 1637545..1638405 (+) 861 WP_041850585.1 polyprenyl synthetase family protein -
  C7M23_RS08435 (C7M23_01657) comX 1638418..1638582 (+) 165 WP_015384519.1 competence pheromone ComX -
  C7M23_RS08440 (C7M23_01658) comP 1638594..1640894 (+) 2301 WP_088300729.1 histidine kinase Regulator
  C7M23_RS08445 (C7M23_01659) comA 1640975..1641619 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M23_RS08450 (C7M23_01660) yuxO 1641638..1642018 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M23_RS08455 (C7M23_01661) mnhG 1642061..1642435 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C7M23_RS08460 (C7M23_01662) mrpF 1642419..1642703 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M23_RS08465 (C7M23_01663) mrpE 1642703..1643179 (-) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  C7M23_RS08470 (C7M23_01664) mrpD 1643185..1644666 (-) 1482 WP_003228817.1 Na+/H+ antiporter subunit D -
  C7M23_RS08475 (C7M23_01665) mrpC 1644659..1645000 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  C7M23_RS08480 (C7M23_01666) mrpB 1645000..1645431 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88544.65 Da        Isoelectric Point: 7.6650

>NTDB_id=282863 C7M23_RS08440 WP_088300729.1 1638594..1640894(+) (comP) [Bacillus subtilis strain SRCM102745]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYEKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=282863 C7M23_RS08440 WP_088300729.1 1638594..1640894(+) (comP) [Bacillus subtilis strain SRCM102745]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCTGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCTATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGCTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACTTCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTAGGCACTGTGTTATTCAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGAGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCTAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTAATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCCGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.653

100

0.59


Multiple sequence alignment