Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M23_RS05415 Genome accession   NZ_CP028209
Coordinates   1039726..1039845 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102745     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1034726..1044845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS05385 (C7M23_01061) - 1035386..1035946 (-) 561 WP_015714897.1 hypothetical protein -
  C7M23_RS05390 (C7M23_01062) - 1035939..1036586 (-) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  C7M23_RS05395 (C7M23_01063) - 1036589..1037380 (-) 792 WP_250622481.1 hypothetical protein -
  C7M23_RS05400 (C7M23_01064) - 1037396..1038070 (-) 675 WP_015714894.1 hypothetical protein -
  C7M23_RS05405 (C7M23_01065) - 1038057..1038845 (-) 789 WP_015714893.1 membrane protein -
  C7M23_RS05410 (C7M23_01066) - 1038994..1039473 (-) 480 WP_015714892.1 hypothetical protein -
  C7M23_RS05415 (C7M23_01067) phrF 1039726..1039845 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M23_RS05420 (C7M23_01068) rapF 1039829..1040974 (-) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  C7M23_RS05425 (C7M23_01069) ywhK 1041204..1042559 (+) 1356 WP_131228203.1 YncE family protein -
  C7M23_RS05430 (C7M23_01070) ywhL 1042599..1043975 (+) 1377 WP_131228202.1 YncE family protein -
  C7M23_RS05435 (C7M23_01071) albG 1043981..1044682 (-) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=282851 C7M23_RS05415 WP_009968329.1 1039726..1039845(-) (phrF) [Bacillus subtilis strain SRCM102745]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282851 C7M23_RS05415 WP_009968329.1 1039726..1039845(-) (phrF) [Bacillus subtilis strain SRCM102745]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment