Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | C7M22_RS19925 | Genome accession | NZ_CP028208 |
| Coordinates | 4021416..4021682 (-) | Length | 88 a.a. |
| NCBI ID | WP_042635730.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102744 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4016416..4026682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M22_RS19875 (C7M22_04009) | sinR | 4016580..4016915 (+) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| C7M22_RS19880 (C7M22_04010) | tasA | 4016963..4017748 (-) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| C7M22_RS19885 (C7M22_04011) | sipW | 4017813..4018397 (-) | 585 | WP_160223172.1 | signal peptidase I SipW | - |
| C7M22_RS19890 (C7M22_04012) | tapA | 4018369..4019040 (-) | 672 | WP_160223173.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M22_RS19895 (C7M22_04013) | - | 4019299..4019628 (+) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| C7M22_RS19900 (C7M22_04014) | - | 4019668..4019847 (-) | 180 | WP_160223174.1 | YqzE family protein | - |
| C7M22_RS19905 (C7M22_04015) | comGG | 4019904..4020281 (-) | 378 | WP_160223175.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| C7M22_RS19910 (C7M22_04016) | comGF | 4020282..4020782 (-) | 501 | WP_257474763.1 | competence type IV pilus minor pilin ComGF | - |
| C7M22_RS19915 (C7M22_04017) | comGE | 4020691..4021005 (-) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| C7M22_RS19920 (C7M22_04018) | comGD | 4020989..4021426 (-) | 438 | WP_012117983.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C7M22_RS19925 (C7M22_04019) | comGC | 4021416..4021682 (-) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C7M22_RS19930 (C7M22_04020) | comGB | 4021729..4022766 (-) | 1038 | WP_061582071.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C7M22_RS19935 (C7M22_04021) | comGA | 4022753..4023823 (-) | 1071 | WP_043020785.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C7M22_RS19940 (C7M22_04022) | - | 4024020..4024970 (-) | 951 | WP_160223176.1 | magnesium transporter CorA family protein | - |
| C7M22_RS19945 (C7M22_04023) | - | 4025116..4026417 (+) | 1302 | WP_012117986.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9721.32 Da Isoelectric Point: 6.2027
>NTDB_id=282829 C7M22_RS19925 WP_042635730.1 4021416..4021682(-) (comGC) [Bacillus velezensis strain SRCM102744]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=282829 C7M22_RS19925 WP_042635730.1 4021416..4021682(-) (comGC) [Bacillus velezensis strain SRCM102744]
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCTCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAAAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCTCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAAAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |