Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D9Y32_RS15275 Genome accession   NZ_CP033218
Coordinates   2968675..2969298 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain TCCC 11148     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2963675..2974298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS15240 (D9Y32_15265) - 2963939..2964100 (+) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  D9Y32_RS15245 (D9Y32_15270) - 2964181..2964399 (-) 219 WP_003182236.1 YneF family protein -
  D9Y32_RS15250 (D9Y32_15275) sirA 2964484..2964921 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  D9Y32_RS15255 (D9Y32_15280) recP/tkt 2965076..2967079 (-) 2004 WP_009328229.1 transketolase Machinery gene
  D9Y32_RS15260 (D9Y32_15285) - 2967246..2967479 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  D9Y32_RS15265 (D9Y32_15290) - 2967545..2968192 (-) 648 WP_003182227.1 recombinase family protein -
  D9Y32_RS15270 (D9Y32_15295) yneA 2968211..2968522 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  D9Y32_RS15275 (D9Y32_15300) dinR/lexA 2968675..2969298 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  D9Y32_RS15280 (D9Y32_15305) nucA/comI 2969494..2969922 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  D9Y32_RS15285 (D9Y32_15310) - 2970281..2971120 (-) 840 WP_003182218.1 thymidylate synthase -
  D9Y32_RS15290 (D9Y32_15315) - 2971180..2971941 (-) 762 WP_142782537.1 hypothetical protein -
  D9Y32_RS15295 (D9Y32_15320) - 2972032..2972865 (-) 834 WP_003182213.1 prohibitin family protein -
  D9Y32_RS23105 - 2972858..2972998 (-) 141 WP_003182211.1 hypothetical protein -
  D9Y32_RS15300 (D9Y32_15325) wrbA 2973319..2973930 (-) 612 WP_011198006.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=282737 D9Y32_RS15275 WP_003182222.1 2968675..2969298(+) (dinR/lexA) [Bacillus licheniformis strain TCCC 11148]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=282737 D9Y32_RS15275 WP_003182222.1 2968675..2969298(+) (dinR/lexA) [Bacillus licheniformis strain TCCC 11148]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTCCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913

Multiple sequence alignment