Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   D9Y32_RS15255 Genome accession   NZ_CP033218
Coordinates   2965076..2967079 (-) Length   667 a.a.
NCBI ID   WP_009328229.1    Uniprot ID   Q65J38
Organism   Bacillus licheniformis strain TCCC 11148     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2960076..2972079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS15205 (D9Y32_15230) sspO 2960422..2960568 (+) 147 WP_003182252.1 small acid-soluble spore protein O -
  D9Y32_RS15210 (D9Y32_15235) - 2960610..2960756 (+) 147 WP_003182250.1 small acid-soluble spore protein P -
  D9Y32_RS15215 (D9Y32_15240) - 2960892..2961299 (+) 408 WP_003182248.1 Hsp20/alpha crystallin family protein -
  D9Y32_RS15220 (D9Y32_15245) - 2961504..2961932 (+) 429 WP_003182245.1 DUF2621 domain-containing protein -
  D9Y32_RS15225 (D9Y32_15250) - 2961968..2962462 (-) 495 WP_142782536.1 CcdC family protein -
  D9Y32_RS15230 (D9Y32_15255) spo0A 2962536..2962907 (-) 372 WP_009328223.1 response regulator Regulator
  D9Y32_RS15235 (D9Y32_15260) - 2962989..2963696 (-) 708 WP_009328224.1 cytochrome c biogenesis protein CcdA -
  D9Y32_RS15240 (D9Y32_15265) - 2963939..2964100 (+) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  D9Y32_RS15245 (D9Y32_15270) - 2964181..2964399 (-) 219 WP_003182236.1 YneF family protein -
  D9Y32_RS15250 (D9Y32_15275) sirA 2964484..2964921 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  D9Y32_RS15255 (D9Y32_15280) recP/tkt 2965076..2967079 (-) 2004 WP_009328229.1 transketolase Machinery gene
  D9Y32_RS15260 (D9Y32_15285) - 2967246..2967479 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  D9Y32_RS15265 (D9Y32_15290) - 2967545..2968192 (-) 648 WP_003182227.1 recombinase family protein -
  D9Y32_RS15270 (D9Y32_15295) yneA 2968211..2968522 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  D9Y32_RS15275 (D9Y32_15300) dinR/lexA 2968675..2969298 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  D9Y32_RS15280 (D9Y32_15305) nucA/comI 2969494..2969922 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  D9Y32_RS15285 (D9Y32_15310) - 2970281..2971120 (-) 840 WP_003182218.1 thymidylate synthase -
  D9Y32_RS15290 (D9Y32_15315) - 2971180..2971941 (-) 762 WP_142782537.1 hypothetical protein -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72636.78 Da        Isoelectric Point: 4.8350

>NTDB_id=282736 D9Y32_RS15255 WP_009328229.1 2965076..2967079(-) (recP/tkt) [Bacillus licheniformis strain TCCC 11148]
MKTIELKSVATIRTLSIDAIEKAKSGHPGMPMGTAPMAYALWTKMMNVSPENPNWFNRDRFVLSAGHGSMLLYSMLHLSG
YDVSIEDLKNFRQWGSKTPGHPEFGHTPGVDATTGPLGQGIGMAVGMALAERHLAETYNRDDYRVVDHYTYSICGDGDLM
EGISSEAASLAGHLNLGRLIVLYDSNDISLDGELNRSFSENVKQRFEAMNWEVLYVEDGNNIAEITAAIEKAKQNEKQPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGSEEAKLTKEAYEWTYEEDFYVPSEVYEHFNETVKEAGKKKEAEWNELFSAYKK
AHPELAEELELAIKGELPEGWDQKVPVYEKGSSLASRASSGEVLNGIAQQVPFFFGGSADLAGSNKTTIKNGGDVSAKDY
AGRNIWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLALQSKDQPTALVLTRQNLPTIDQSAETAYEGVKKGAYVVSKSQNEKPEAILLASG
SEVGLALDAQSELQKEGIDVSVVSVPSWDRFDKQPAEYKNAVLPTDVTKRLAIEMGSPLGWERYTGTDGDILGIDQFGAS
APGETIMKEYGFTPANVVDRVKKLLNR

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=282736 D9Y32_RS15255 WP_009328229.1 2965076..2967079(-) (recP/tkt) [Bacillus licheniformis strain TCCC 11148]
ATGAAAACGATTGAATTAAAATCTGTCGCAACAATACGAACACTCTCCATAGACGCGATTGAAAAAGCTAAATCCGGTCA
CCCCGGCATGCCGATGGGGACTGCTCCGATGGCTTATGCGCTTTGGACAAAAATGATGAATGTCAGCCCTGAAAATCCGA
ATTGGTTTAACAGGGACCGTTTTGTGCTTTCCGCCGGACACGGATCAATGCTTTTGTACAGCATGCTTCACTTAAGCGGA
TATGACGTTTCAATTGAAGACCTCAAAAATTTCCGCCAATGGGGAAGCAAAACTCCTGGGCATCCGGAATTCGGACATAC
TCCGGGTGTAGATGCGACTACAGGTCCGCTTGGCCAAGGAATCGGAATGGCTGTCGGAATGGCGCTTGCTGAACGTCACC
TTGCTGAAACTTACAACCGTGACGACTATCGCGTCGTTGACCATTATACATACAGCATTTGCGGTGACGGAGACTTGATG
GAGGGAATTTCATCCGAAGCGGCTTCGCTTGCGGGACATTTGAACCTCGGCCGTCTCATCGTGCTTTATGATTCAAATGA
CATTTCGCTTGACGGCGAACTAAACCGCTCATTCTCTGAAAATGTAAAGCAGCGCTTTGAAGCGATGAATTGGGAAGTGC
TTTATGTTGAAGACGGCAACAACATTGCCGAAATTACGGCGGCCATCGAGAAAGCGAAACAAAATGAAAAGCAGCCGACA
TTAATTGAAGTGAAAACAACGATCGGTTTCGGTTCTCCAAACCGTGCGGGCACATCCGGCGTCCACGGCGCTCCGCTCGG
ATCAGAAGAGGCGAAATTAACGAAGGAAGCGTATGAGTGGACATACGAAGAAGATTTTTATGTTCCTTCCGAAGTGTACG
AGCACTTTAACGAAACAGTGAAGGAAGCGGGCAAGAAAAAAGAGGCGGAATGGAACGAACTGTTCTCCGCATACAAGAAA
GCCCACCCGGAACTTGCCGAAGAGCTTGAACTGGCGATCAAAGGCGAGCTTCCTGAAGGATGGGATCAGAAAGTACCTGT
ATATGAAAAAGGAAGCAGCCTTGCTTCACGTGCATCCTCAGGTGAAGTGTTAAACGGAATCGCTCAACAAGTGCCGTTTT
TCTTTGGCGGATCCGCGGACTTGGCCGGTTCCAACAAAACGACAATCAAAAACGGCGGAGATGTTTCAGCGAAGGATTAC
GCCGGCAGAAATATCTGGTTCGGTGTAAGGGAATTTGCGATGGGAGCAGCTTTGAACGGAATGGCTCTTCACGGAGGCCT
CCGCGTATTCGGCGGAACGTTCTTCGTTTTCTCCGATTACTTGAGACCAGCGATTCGTCTTGCTGCATTGATGGGGCTTC
CTGTCACCTATGTATTTACACATGACAGCATTGCCGTCGGTGAAGACGGACCGACTCATGAGCCGATTGAACAGCTGGCA
TCACTTCGTGCGCTGCCGAACTTGTCCGTCATCAGACCTGCCGACGGAAATGAAACAGCAGCTGCCTGGAAGCTCGCGCT
TCAATCAAAAGACCAGCCGACTGCGCTTGTGTTGACACGCCAAAACTTGCCGACAATCGATCAGTCTGCTGAAACGGCTT
ATGAAGGCGTTAAAAAGGGTGCATATGTCGTTTCAAAAAGCCAAAACGAAAAACCGGAAGCGATCTTGCTTGCGAGCGGA
TCTGAAGTTGGCCTTGCGCTTGATGCACAAAGCGAGCTGCAAAAAGAAGGCATTGACGTATCCGTTGTCAGCGTTCCGTC
ATGGGATCGATTTGACAAGCAGCCGGCTGAATATAAAAACGCTGTTCTTCCAACTGATGTGACAAAGCGTCTCGCAATTG
AAATGGGATCGCCGCTCGGATGGGAGAGATATACAGGCACTGACGGGGACATTCTCGGAATCGACCAGTTCGGTGCATCA
GCTCCTGGCGAAACGATCATGAAAGAATACGGTTTTACGCCTGCGAATGTAGTTGACCGGGTGAAAAAACTGTTAAATCG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65J38

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

57.768

99.4

0.574


Multiple sequence alignment