Detailed information NTG0282689

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M21_RS01410
• Genome accession: NZ_CP028207
• Coordinates: 253007..254155 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102743
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 248007..259155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M21_RS01380 (C7M21_00273)	-	248144..248902 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
C7M21_RS01385 (C7M21_00274)	-	248896..249843 (-)	948	WP_160222847.1	iron chelate uptake ABC transporter family permease subunit	-
C7M21_RS01390 (C7M21_00275)	ceuB	249833..250786 (-)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M21_RS01395 (C7M21_00276)	-	251201..252565 (+)	1365	WP_059366589.1	aspartate kinase	-
C7M21_RS01400	-	252645..252755 (+)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M21_RS01405 (C7M21_00278)	phrC	252904..253023 (-)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M21_RS01410 (C7M21_00279)	rapC	253007..254155 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M21_RS01415 (C7M21_00280)	-	254308..255741 (-)	1434	WP_162992601.1	sensor histidine kinase	-
C7M21_RS01420 (C7M21_00281)	-	255728..256411 (-)	684	WP_007410267.1	response regulator transcription factor	-
C7M21_RS01425 (C7M21_00282)	-	256624..258060 (+)	1437	WP_160222846.1	ABC transporter permease	-
C7M21_RS01430 (C7M21_00283)	-	258075..258758 (+)	684	WP_025284225.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282689 C7M21_RS01410 WP_007410270.1 253007..254155(-) (rapC) [Bacillus velezensis strain SRCM102743]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282689 C7M21_RS01410 WP_007410270.1 253007..254155(-) (rapC) [Bacillus velezensis strain SRCM102743]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568