Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   C7M21_RS01405 Genome accession   NZ_CP028207
Coordinates   252904..253023 (-) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102743     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 247904..258023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M21_RS01380 (C7M21_00273) - 248144..248902 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  C7M21_RS01385 (C7M21_00274) - 248896..249843 (-) 948 WP_160222847.1 iron chelate uptake ABC transporter family permease subunit -
  C7M21_RS01390 (C7M21_00275) ceuB 249833..250786 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  C7M21_RS01395 (C7M21_00276) - 251201..252565 (+) 1365 WP_059366589.1 aspartate kinase -
  C7M21_RS01400 - 252645..252755 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  C7M21_RS01405 (C7M21_00278) phrC 252904..253023 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C7M21_RS01410 (C7M21_00279) rapC 253007..254155 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  C7M21_RS01415 (C7M21_00280) - 254308..255741 (-) 1434 WP_162992601.1 sensor histidine kinase -
  C7M21_RS01420 (C7M21_00281) - 255728..256411 (-) 684 WP_007410267.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=282688 C7M21_RS01405 WP_033575081.1 252904..253023(-) (phrC) [Bacillus velezensis strain SRCM102743]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282688 C7M21_RS01405 WP_033575081.1 252904..253023(-) (phrC) [Bacillus velezensis strain SRCM102743]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744

Multiple sequence alignment