Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   C7M19_RS13020 Genome accession   NZ_CP028205
Coordinates   2664191..2664310 (+) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102741     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 2659191..2669310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M19_RS13005 (C7M19_02628) - 2660803..2661486 (+) 684 WP_007410267.1 response regulator transcription factor -
  C7M19_RS13010 (C7M19_02629) - 2661473..2662906 (+) 1434 WP_162992601.1 sensor histidine kinase -
  C7M19_RS13015 (C7M19_02630) rapC 2663059..2664207 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  C7M19_RS13020 (C7M19_02631) phrC 2664191..2664310 (+) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C7M19_RS13025 - 2664459..2664569 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  C7M19_RS13030 (C7M19_02633) - 2664649..2666013 (-) 1365 WP_059366589.1 aspartate kinase -
  C7M19_RS13035 (C7M19_02634) ceuB 2666427..2667380 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  C7M19_RS13040 (C7M19_02635) - 2667370..2668317 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  C7M19_RS13045 (C7M19_02636) - 2668311..2669069 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=282584 C7M19_RS13020 WP_033575081.1 2664191..2664310(+) (phrC) [Bacillus velezensis strain SRCM102741]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282584 C7M19_RS13020 WP_033575081.1 2664191..2664310(+) (phrC) [Bacillus velezensis strain SRCM102741]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744

Multiple sequence alignment