Detailed information NTG0282583

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M19_RS13015
• Genome accession: NZ_CP028205
• Coordinates: 2663059..2664207 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102741
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2658059..2669207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M19_RS12995 (C7M19_02626)	-	2658456..2659139 (-)	684	WP_025284225.1	ABC transporter ATP-binding protein	-
C7M19_RS13000 (C7M19_02627)	-	2659154..2660590 (-)	1437	WP_160222846.1	ABC transporter permease	-
C7M19_RS13005 (C7M19_02628)	-	2660803..2661486 (+)	684	WP_007410267.1	response regulator transcription factor	-
C7M19_RS13010 (C7M19_02629)	-	2661473..2662906 (+)	1434	WP_162992601.1	sensor histidine kinase	-
C7M19_RS13015 (C7M19_02630)	rapC	2663059..2664207 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M19_RS13020 (C7M19_02631)	phrC	2664191..2664310 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M19_RS13025	-	2664459..2664569 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M19_RS13030 (C7M19_02633)	-	2664649..2666013 (-)	1365	WP_059366589.1	aspartate kinase	-
C7M19_RS13035 (C7M19_02634)	ceuB	2666427..2667380 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M19_RS13040 (C7M19_02635)	-	2667370..2668317 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
C7M19_RS13045 (C7M19_02636)	-	2668311..2669069 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282583 C7M19_RS13015 WP_007410270.1 2663059..2664207(+) (rapC) [Bacillus velezensis strain SRCM102741]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282583 C7M19_RS13015 WP_007410270.1 2663059..2664207(+) (rapC) [Bacillus velezensis strain SRCM102741]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568