Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M18_RS14435 Genome accession   NZ_CP028204
Coordinates   2843792..2844391 (+) Length   199 a.a.
NCBI ID   WP_160216833.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102755     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2838792..2849391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M18_RS14405 (C7M18_02902) - 2839006..2839461 (+) 456 WP_014417614.1 flavodoxin -
  C7M18_RS14410 (C7M18_02903) dapD 2839543..2840253 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C7M18_RS14415 (C7M18_02904) - 2840324..2841448 (+) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  C7M18_RS14420 (C7M18_02905) - 2841509..2841754 (+) 246 WP_003154596.1 YkuS family protein -
  C7M18_RS14425 (C7M18_02906) - 2841788..2842594 (-) 807 WP_021493755.1 mechanosensitive ion channel family protein -
  C7M18_RS14430 (C7M18_02907) - 2842882..2843340 (+) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  C7M18_RS14435 (C7M18_02908) rok 2843792..2844391 (+) 600 WP_160216833.1 transcriptional regulator Rok Regulator
  C7M18_RS14440 (C7M18_02909) - 2844412..2845404 (-) 993 WP_014417619.1 hypothetical protein -
  C7M18_RS14445 (C7M18_02910) - 2845550..2846152 (+) 603 WP_160216834.1 molybdenum cofactor guanylyltransferase -
  C7M18_RS14450 (C7M18_02911) - 2846204..2847223 (+) 1020 WP_095059974.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M18_RS14455 (C7M18_02912) glp 2847241..2848533 (+) 1293 WP_022553413.1 gephyrin-like molybdotransferase Glp -
  C7M18_RS14460 (C7M18_02913) mobB 2848494..2849015 (+) 522 WP_029973679.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 199 a.a.        Molecular weight: 22653.70 Da        Isoelectric Point: 9.6909

>NTDB_id=282512 C7M18_RS14435 WP_160216833.1 2843792..2844391(+) (rok) [Bacillus velezensis strain SRCM102755]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 600 bp        

>NTDB_id=282512 C7M18_RS14435 WP_160216833.1 2843792..2844391(+) (rok) [Bacillus velezensis strain SRCM102755]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGCAGTCTATTACGTCTCTTCCCGCCGGTATTCCGGACGGTTCTACAAG
AAGAAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACA
ATGCAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTT
ATGCAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATATCGCGGCCAATATATTCTTGAAGGAGAAATTTCTCA
GGAAACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.641

97.99

0.839

Multiple sequence alignment