Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M17_RS09635 Genome accession   NZ_CP028202
Coordinates   1807129..1807320 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102754     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1802129..1812320
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS09610 (C7M17_01904) appD 1802457..1803443 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M17_RS09615 (C7M17_01905) yjaZ 1803635..1804420 (-) 786 WP_160245278.1 DUF2268 domain-containing protein -
  C7M17_RS09620 (C7M17_01906) fabF 1804496..1805737 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M17_RS09625 (C7M17_01907) fabH 1805760..1806698 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M17_RS09630 (C7M17_01908) yjzB 1806863..1807099 (+) 237 WP_015383342.1 spore coat protein YjzB -
  C7M17_RS09635 (C7M17_01909) comZ 1807129..1807320 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M17_RS09640 (C7M17_01910) med 1807335..1808288 (-) 954 WP_041351863.1 transcriptional regulator Med Regulator
  C7M17_RS09645 (C7M17_01911) - 1808379..1808936 (-) 558 WP_160245279.1 hypothetical protein -
  C7M17_RS09650 (C7M17_01912) - 1809018..1809752 (-) 735 WP_003245223.1 hypothetical protein -
  C7M17_RS09655 (C7M17_01913) yjzD 1810003..1810188 (+) 186 WP_160245280.1 YjzD family protein -
  C7M17_RS09660 (C7M17_01914) yjzC 1810235..1810414 (-) 180 WP_003245356.1 YjzC family protein -
  C7M17_RS09665 (C7M17_01915) argF 1810499..1811458 (-) 960 WP_128747033.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=282415 C7M17_RS09635 WP_003224559.1 1807129..1807320(-) (comZ) [Bacillus subtilis strain SRCM102754]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=282415 C7M17_RS09635 WP_003224559.1 1807129..1807320(-) (comZ) [Bacillus subtilis strain SRCM102754]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment