Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C7M17_RS09515 Genome accession   NZ_CP028202
Coordinates   1783885..1785006 (-) Length   373 a.a.
NCBI ID   WP_250628987.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102754     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1778885..1790006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS09490 (C7M17_01881) cwlQ 1779025..1779759 (+) 735 WP_250628981.1 bifunctional muramidase/murein lytic transglycosylase -
  C7M17_RS09495 (C7M17_01882) bhbI 1780014..1780412 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  C7M17_RS09500 (C7M17_01883) spxH 1780409..1781308 (+) 900 WP_122895141.1 protease adaptor protein SpxH -
  C7M17_RS09505 (C7M17_01885) - 1781622..1781789 (+) 168 WP_003244944.1 hypothetical protein -
  C7M17_RS09510 (C7M17_01886) pepF 1781826..1783655 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  C7M17_RS09515 (C7M17_01887) coiA 1783885..1785006 (-) 1122 WP_250628987.1 competence protein CoiA Machinery gene
  C7M17_RS09520 - 1785080..1785202 (+) 123 WP_122895143.1 hypothetical protein -
  C7M17_RS09525 (C7M17_01888) mecA 1785197..1785853 (-) 657 WP_160245275.1 adaptor protein MecA Regulator
  C7M17_RS09530 - 1785820..1785960 (-) 141 WP_119122854.1 hypothetical protein -
  C7M17_RS09535 (C7M17_01889) yjbE 1786130..1786786 (+) 657 WP_024573350.1 TerC family protein -
  C7M17_RS09540 (C7M17_01890) spx 1786829..1787224 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  C7M17_RS09545 (C7M17_01891) yjbC 1787405..1787983 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  C7M17_RS09550 (C7M17_01892) yjbB 1788147..1789364 (-) 1218 WP_122895145.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43807.84 Da        Isoelectric Point: 10.0622

>NTDB_id=282411 C7M17_RS09515 WP_250628987.1 1783885..1785006(-) (coiA) [Bacillus subtilis strain SRCM102754]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHTMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=282411 C7M17_RS09515 WP_250628987.1 1783885..1785006(-) (coiA) [Bacillus subtilis strain SRCM102754]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGATATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATTCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTATACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCCAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAAAGTCCGGTTTTTGTGTGGCAAGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACACAATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

100

0.987


Multiple sequence alignment