Detailed information NTG0282386

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: C7M17_RS01990
• Genome accession: NZ_CP028202
• Coordinates: 345727..348057 (+)
• Length: 776 a.a.
• NCBI ID: WP_160245074.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102754
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 340727..353057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M17_RS01950 (C7M17_00373)	yhbY	340964..341254 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
C7M17_RS01955 (C7M17_00374)	nadD	341266..341835 (+)	570	WP_021480066.1	nicotinate-nucleotide adenylyltransferase	-
C7M17_RS01960 (C7M17_00375)	yqeK	341825..342385 (+)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
C7M17_RS01965 (C7M17_00376)	rsfS	342403..342759 (+)	357	WP_014480315.1	ribosome silencing factor	-
C7M17_RS01970 (C7M17_00377)	yqeM	342756..343499 (+)	744	WP_122894876.1	class I SAM-dependent methyltransferase	-
C7M17_RS01975 (C7M17_00378)	comER	343565..344386 (-)	822	WP_160245073.1	late competence protein ComER	-
C7M17_RS01980 (C7M17_00379)	comEA	344470..345087 (+)	618	WP_122894878.1	competence protein ComEA	Machinery gene
C7M17_RS01985 (C7M17_00380)	comEB	345154..345723 (+)	570	WP_003229978.1	ComE operon protein 2	-
C7M17_RS01990 (C7M17_00381)	comEC	345727..348057 (+)	2331	WP_160245074.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
C7M17_RS01995 (C7M17_00382)	yqzM	348097..348231 (-)	135	WP_003229983.1	YqzM family protein	-
C7M17_RS02000	-	348272..348421 (+)	150	WP_003229985.1	hypothetical protein	-
C7M17_RS02005 (C7M17_00383)	holA	348461..349504 (+)	1044	WP_003229987.1	DNA polymerase III subunit delta	-
C7M17_RS02010 (C7M17_00384)	rpsT	349519..349785 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
C7M17_RS02015 (C7M17_00385)	gpr	349989..351095 (+)	1107	WP_003229991.1	GPR endopeptidase	-
C7M17_RS02020 (C7M17_00386)	spoIIP	351158..352363 (+)	1206	WP_003229993.1	spore autolysin SpoIIP	-
C7M17_RS02025 (C7M17_00387)	yqxA	352380..352718 (+)	339	WP_087614625.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86783.33 Da
• Isoelectric Point: 7.1434

>NTDB_id=282386 C7M17_RS01990 WP_160245074.1 345727..348057(+) (comEC) [Bacillus subtilis strain SRCM102754]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGVAPSVLRATLMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQKVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=282386 C7M17_RS01990 WP_160245074.1 345727..348057(+) (comEC) [Bacillus subtilis strain SRCM102754]
ATGCGTAATTCGCGCTTATTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATAGGCAGGGAACTTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTTTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATTCGCCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCACTCTATGTGATGTTGACCGGCGTTGCTCCTTCAGTGCTACGCGCCACTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGACAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTTCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGGCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
ACACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGTTCTGAGCTGGATTTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAAAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	98.325	100	0.983