Detailed information NTG0282306

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: D0784_RS14640
• Genome accession: NZ_CP033134
• Coordinates: 3095583..3098405 (+)
• Length: 940 a.a.
• NCBI ID: WP_122020074.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain 170502
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3090583..3103405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0784_RS14620 (D0784_14610)	csrD	3090664..3092673 (-)	2010	WP_122020072.1	RNase E specificity factor CsrD	-
D0784_RS14625 (D0784_14615)	ssb	3092921..3093469 (-)	549	WP_122020073.1	single-stranded DNA-binding protein	Machinery gene
D0784_RS14630 (D0784_14620)	qstR	3093763..3094407 (+)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
D0784_RS14635 (D0784_14625)	galU	3094572..3095444 (+)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
D0784_RS14640 (D0784_14630)	uvrA	3095583..3098405 (+)	2823	WP_122020074.1	excinuclease ABC subunit UvrA	Machinery gene
D0784_RS14645 (D0784_14635)	-	3098473..3100257 (+)	1785	WP_122020075.1	PglL family O-oligosaccharyltransferase	-
D0784_RS14650 (D0784_14640)	-	3100314..3101434 (-)	1121	Protein_2720	pyridoxal-phosphate-dependent aminotransferase family protein	-
D0784_RS14660 (D0784_14650)	lysC	3101959..3103311 (+)	1353	WP_122020077.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103795.19 Da
• Isoelectric Point: 6.5392

>NTDB_id=282306 D0784_RS14640 WP_122020074.1 3095583..3098405(+) (uvrA) [Vibrio campbellii strain 170502]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYGFDLHAPFNALPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKAIDGVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=282306 D0784_RS14640 WP_122020074.1 3095583..3098405(+) (uvrA) [Vibrio campbellii strain 170502]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGACACTTTGTACGCTGAAGGTCAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTACGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGTAGCAAAATGATGCTACTTGCGCCTATTGTGAAAGAACGTAAAGGT
GAGCATGTTAAGACTCTAGAGAACCTCGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATCGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTGGCTGAATCCTTCGAAACCACACTAGAGCTATCTGGTGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCGGGGGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGGGTTCGATCTTCACGCACCATTTAACGCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAATACACTTGAACGCCGTTACCGCGACACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACCAAGTCTTGTTCAAGCTGTGGCGGTACTCGTCTGCGCCTTGAAGCTCGTAACGTCTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAGTTCTTCCACACTTTGAAGCTTGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTACAATTCCTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGCAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCGAGCCAAATTGGTGCGGGTCTAGTCGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACCTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGTGCCGGCGTACACGGCGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAT
TACTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGTTTAGAGCACTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACGCCACGCTCAAACCCAGCCACTTACACGGGAATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGAGGTCGCTGTGAAGCGTGTCAGGGTGATGGTGT
AATCAAGGTGGAAATGCACTTCTTACCTGACGTTTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGGCCATTGATGGAGTATTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCGGTACCTGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTGAAACTGGCTCGAGAGCTGTCTAAGCGTGATACTGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACCGGTCTGCACTTCCACGATATCCAACAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTCGTCATCGAGCATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGTGGTGAGATCATTGCACAAGGAACCCCTGAAGATGTGTCTCAGATCGAAGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.537	100	0.577
uvrA	Streptococcus pneumoniae TIGR4	57.537	100	0.577
uvrA	Streptococcus pneumoniae D39	57.537	100	0.577