Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M16_RS03500 Genome accession   NZ_CP028201
Coordinates   713204..713998 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM102753     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 708204..718998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS03470 (C7M16_00685) sxzA 709043..710074 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  C7M16_RS03475 (C7M16_00686) yfhB 710189..711070 (+) 882 WP_160221451.1 PhzF family phenazine biosynthesis isomerase -
  C7M16_RS03480 (C7M16_00687) yfhC 711158..711742 (+) 585 WP_003243940.1 nitroreductase -
  C7M16_RS03485 (C7M16_00688) yfhD 711781..711972 (-) 192 WP_003233561.1 YfhD family protein -
  C7M16_RS03490 (C7M16_00689) yfhE 712039..712149 (-) 111 WP_003223230.1 YfhE family protein -
  C7M16_RS03495 (C7M16_00690) yfhF 712204..713115 (-) 912 WP_160221452.1 TIGR01777 family oxidoreductase -
  C7M16_RS03500 (C7M16_00691) recX 713204..713998 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  C7M16_RS03505 (C7M16_00692) yfhH 714000..714314 (+) 315 WP_003244592.1 YfhH family protein -
  C7M16_RS03510 (C7M16_00694) yfhI 714457..715650 (+) 1194 WP_003243500.1 MFS transporter -
  C7M16_RS03515 (C7M16_00695) sspK 715683..715835 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M16_RS03520 (C7M16_00696) yfhJ 715960..716229 (+) 270 WP_003243789.1 YfhJ family protein -
  C7M16_RS03525 (C7M16_00697) yfhK 716374..716892 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  C7M16_RS03530 (C7M16_00698) spdL 716977..717309 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  C7M16_RS03535 (C7M16_00699) ephM 717296..718156 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=282305 C7M16_RS03500 WP_003243354.1 713204..713998(+) (recX) [Bacillus subtilis strain SRCM102753]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=282305 C7M16_RS03500 WP_003243354.1 713204..713998(+) (recX) [Bacillus subtilis strain SRCM102753]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment