Detailed information NTG0282277

Bioinformatically predicted

Overview

• Name: letA
• Type: Regulator
• Locus tag: D0784_RS10175
• Genome accession: NZ_CP033134
• Coordinates: 2153900..2154544 (-)
• Length: 214 a.a.
• NCBI ID: WP_005434947.1
• Uniprot ID: A0ABQ5Y0T2
• Organism: Vibrio campbellii strain 170502
• Function: regulate competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2148900..2159544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0784_RS10165 (D0784_10165)	pgsA	2151462..2152019 (-)	558	WP_005530466.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
D0784_RS10170 (D0784_10170)	uvrC	2152066..2153898 (-)	1833	WP_122019831.1	excinuclease ABC subunit UvrC	-
D0784_RS10175 (D0784_10175)	letA	2153900..2154544 (-)	645	WP_005434947.1	UvrY/SirA/GacA family response regulator transcription factor	Regulator
D0784_RS10180 (D0784_10180)	-	2154977..2157340 (+)	2364	WP_122020207.1	DNA polymerase II	-
D0784_RS10185 (D0784_10185)	-	2157381..2158148 (-)	768	WP_122019832.1	nucleotidyltransferase domain-containing protein	-
D0784_RS10190 (D0784_10190)	yeiP	2158336..2158902 (+)	567	WP_005431209.1	elongation factor P-like protein YeiP	-
D0784_RS10195 (D0784_10195)	-	2158905..2159225 (+)	321	WP_005431208.1	HI1450 family dsDNA-mimic protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 23797.38 Da
• Isoelectric Point: 5.6546

>NTDB_id=282277 D0784_RS10175 WP_005434947.1 2153900..2154544(-) (letA) [Vibrio campbellii strain 170502]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEEAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMMMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL

Nucleotide

• Length: 645 bp

>NTDB_id=282277 D0784_RS10175 WP_005434947.1 2153900..2154544(-) (letA) [Vibrio campbellii strain 170502]
TTGATAAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGTCGCAGTAATCATGCAGACGTCGTTTTAATGG
ATATGAACATGCCAGGAATTGGCGGCTTGGAAGCCACGAAAAAGATTCTTCGCGTGAATCCTGATGTAAAAATCATCGTA
TTAACCGTTCATACGGAAAATCCGTTCCCAACTAAAGTGATGCAGGCGGGTGCTTCTGGTTACCTAACCAAAGGTGCAGG
TCCTGATGAAATGGTTAACGCAATTCGTGTGGTTAACAGTGGGCAGCGTTACATCTCGCCAGAGATTGCGCAGCAGATGG
CATTGAGTCAATTCTCACCTGCCTCAGAAAACCCATTTAAAGACCTTTCTGAACGCGAACTGCAGATCATGATGATGATC
ACTAAAGGGCAGAAAGTAACGGATATTTCTGAACAACTGAATTTAAGTCCAAAAACAGTCAACAGCTACCGCTACCGTCT
GTTTAGCAAATTGGACATCAATGGTGACGTTGAGTTAACACACTTAGCGATCCGCCACGGAATGCTGGACACCGAGACCC
TTTAG

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, luxR family (GerE) (149-203)

• Response regulator receiver domain (Response_reg) (4-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
letA	Legionella pneumophila str. Paris	50.476	98.131	0.495
letA	Legionella pneumophila strain ERS1305867	50.476	98.131	0.495