Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAURJH9_RS11580 | Genome accession | NC_009487 |
| Coordinates | 2257889..2258284 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus JH9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2252889..2263284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAURJH9_RS11550 (SaurJH9_2128) | thiE | 2253488..2254129 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAURJH9_RS11555 (SaurJH9_2129) | thiM | 2254131..2254922 (-) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| SAURJH9_RS11560 (SaurJH9_2130) | thiD | 2254906..2255736 (-) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAURJH9_RS11565 (SaurJH9_2131) | tenA | 2255729..2256418 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| SAURJH9_RS11575 (SaurJH9_2132) | sceD | 2256805..2257500 (-) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| SAURJH9_RS11580 (SaurJH9_2133) | ssb | 2257889..2258284 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAURJH9_RS11585 (SaurJH9_2134) | - | 2258478..2258918 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAURJH9_RS11590 (SaurJH9_2135) | fabZ | 2258977..2259417 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAURJH9_RS11595 (SaurJH9_2136) | murA | 2259451..2260716 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAURJH9_RS11600 (SaurJH9_2137) | - | 2260827..2261060 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SAURJH9_RS11605 | - | 2261192..2261284 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| SAURJH9_RS11610 (SaurJH9_2138) | - | 2261622..2262026 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=28206 SAURJH9_RS11580 WP_000932694.1 2257889..2258284(-) (ssb) [Staphylococcus aureus subsp. aureus JH9]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=28206 SAURJH9_RS11580 WP_000932694.1 2257889..2258284(-) (ssb) [Staphylococcus aureus subsp. aureus JH9]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |