Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   EAE94_RS17350 Genome accession   NZ_CP033108
Coordinates   3626271..3626906 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii ATCC 17978     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3621271..3631906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EAE94_RS17330 (EAE94_17420) - 3621347..3622162 (+) 816 WP_000011166.1 DsbC family protein -
  EAE94_RS17335 (EAE94_17425) - 3622407..3623708 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  EAE94_RS17340 (EAE94_17430) thrC 3623764..3624903 (+) 1140 WP_000063593.1 threonine synthase -
  EAE94_RS17345 (EAE94_17435) pbpG 3625012..3626058 (-) 1047 WP_005140205.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  EAE94_RS17350 (EAE94_17440) letA 3626271..3626906 (+) 636 WP_000633799.1 response regulator Regulator
  EAE94_RS17355 (EAE94_17445) pilS 3626917..3628485 (+) 1569 WP_001160327.1 PAS domain-containing sensor histidine kinase Regulator
  EAE94_RS17360 (EAE94_17450) - 3628510..3629931 (+) 1422 WP_049594865.1 sigma-54 dependent transcriptional regulator -
  EAE94_RS17365 (EAE94_17455) - 3629935..3631119 (-) 1185 WP_000939111.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=281975 EAE94_RS17350 WP_000633799.1 3626271..3626906(+) (letA) [Acinetobacter baumannii ATCC 17978]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=281975 EAE94_RS17350 WP_000633799.1 3626271..3626906(+) (letA) [Acinetobacter baumannii ATCC 17978]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACAAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment