Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   C9J78_RS12730 Genome accession   NZ_CP028165
Coordinates   2522530..2523099 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain CFSAN064037     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2517530..2528099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J78_RS12710 (C9J78_12705) - 2519033..2520391 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  C9J78_RS12715 (C9J78_12710) - 2520530..2522041 (+) 1512 WP_000414178.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  C9J78_RS12730 (C9J78_12725) comK/comK1 2522530..2523099 (-) 570 WP_000287265.1 competence protein ComK Regulator
  C9J78_RS12735 (C9J78_12730) - 2523309..2523527 (+) 219 WP_046597402.1 IDEAL domain-containing protein -
  C9J78_RS12740 (C9J78_12735) - 2523608..2524594 (-) 987 WP_000668812.1 lipoate--protein ligase -
  C9J78_RS12745 (C9J78_12740) - 2524793..2524969 (+) 177 WP_000214898.1 YkvS family protein -
  C9J78_RS12750 (C9J78_12745) - 2524984..2525586 (+) 603 WP_001033867.1 CPBP family glutamic-type intramembrane protease -
  C9J78_RS14295 (C9J78_12750) - 2525903..2525965 (+) 63 WP_228764722.1 hypothetical protein -
  C9J78_RS12760 (C9J78_12755) - 2526504..2526602 (+) 99 Protein_2380 hypothetical protein -
  C9J78_RS12765 (C9J78_12760) - 2526615..2526887 (+) 273 WP_029656317.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=281961 C9J78_RS12730 WP_000287265.1 2522530..2523099(-) (comK/comK1) [Staphylococcus aureus strain CFSAN064037]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=281961 C9J78_RS12730 WP_000287265.1 2522530..2523099(-) (comK/comK1) [Staphylococcus aureus strain CFSAN064037]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTATATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment