Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C9J77_RS05920 | Genome accession | NZ_CP028163 |
| Coordinates | 1156945..1157340 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CFSAN064038 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1151945..1162340
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J77_RS05885 (C9J77_05880) | - | 1153114..1153518 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| C9J77_RS05900 (C9J77_05895) | - | 1154171..1154404 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| C9J77_RS05905 (C9J77_05900) | murA | 1154515..1155780 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| C9J77_RS05910 (C9J77_05905) | fabZ | 1155814..1156254 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| C9J77_RS05915 (C9J77_05910) | - | 1156311..1156751 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| C9J77_RS05920 (C9J77_05915) | ssb | 1156945..1157340 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| C9J77_RS05925 (C9J77_05920) | sceD | 1157729..1158424 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| C9J77_RS05930 (C9J77_05925) | tenA | 1158811..1159500 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| C9J77_RS05935 (C9J77_05930) | thiD | 1159493..1160323 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| C9J77_RS05940 (C9J77_05935) | thiM | 1160307..1161098 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| C9J77_RS05945 (C9J77_05940) | thiE | 1161100..1161741 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=281883 C9J77_RS05920 WP_000932694.1 1156945..1157340(+) (ssb) [Staphylococcus aureus strain CFSAN064038]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=281883 C9J77_RS05920 WP_000932694.1 1156945..1157340(+) (ssb) [Staphylococcus aureus strain CFSAN064038]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |