Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LL14B4_RS11885 Genome accession   NZ_CP028160
Coordinates   2386560..2387846 (-) Length   428 a.a.
NCBI ID   WP_033900700.1    Uniprot ID   A0A4S2TCP0
Organism   Lactococcus lactis subsp. lactis strain 14B4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2381560..2392846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL14B4_RS11870 (LL14B4_11860) - 2382751..2383287 (-) 537 WP_023189020.1 hypothetical protein -
  LL14B4_RS11875 (LL14B4_11865) - 2383293..2384624 (-) 1332 WP_033900703.1 NAD(P)/FAD-dependent oxidoreductase -
  LL14B4_RS11880 (LL14B4_11870) - 2384640..2386490 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  LL14B4_RS11885 (LL14B4_11875) eeP 2386560..2387846 (-) 1287 WP_033900700.1 RIP metalloprotease RseP Regulator
  LL14B4_RS11890 (LL14B4_11880) - 2387865..2388668 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  LL14B4_RS11895 (LL14B4_11885) - 2388668..2389402 (-) 735 WP_109991336.1 isoprenyl transferase -
  LL14B4_RS11900 (LL14B4_11890) yajC 2389775..2390107 (-) 333 WP_109991337.1 preprotein translocase subunit YajC -
  LL14B4_RS11905 (LL14B4_11895) - 2390202..2390900 (-) 699 WP_033900689.1 DNA alkylation repair protein -
  LL14B4_RS11910 (LL14B4_11900) rlmH 2390919..2391398 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46383.91 Da        Isoelectric Point: 6.5147

>NTDB_id=281834 LL14B4_RS11885 WP_033900700.1 2386560..2387846(-) (eeP) [Lactococcus lactis subsp. lactis strain 14B4]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=281834 LL14B4_RS11885 WP_033900700.1 2386560..2387846(-) (eeP) [Lactococcus lactis subsp. lactis strain 14B4]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCTGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4S2TCP0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57


Multiple sequence alignment