Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   C9I27_RS09940 Genome accession   NZ_CP028148
Coordinates   1938836..1939612 (+) Length   258 a.a.
NCBI ID   WP_032461591.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TJ11-001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1933836..1944612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9I27_RS09920 - 1935663..1936437 (-) 775 Protein_1848 IS30 family transposase -
  C9I27_RS09930 rlmH 1936833..1937312 (-) 480 WP_002991465.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  C9I27_RS09935 htrA 1937524..1938747 (+) 1224 WP_002991468.1 S1C family serine protease Regulator
  C9I27_RS09940 spo0J 1938836..1939612 (+) 777 WP_032461591.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29072.87 Da        Isoelectric Point: 10.3100

>NTDB_id=281716 C9I27_RS09940 WP_032461591.1 1938836..1939612(+) (spo0J) [Streptococcus pyogenes strain TJ11-001]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=281716 C9I27_RS09940 WP_032461591.1 1938836..1939612(+) (spo0J) [Streptococcus pyogenes strain TJ11-001]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAACACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAACAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581

Multiple sequence alignment