Detailed information NTG0281704

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: UTEX3055_RS04415
• Genome accession: NZ_CP033061
• Coordinates: 855688..857127 (+)
• Length: 479 a.a.
• NCBI ID: WP_126147122.1
• Uniprot ID: -
• Organism: Synechococcus elongatus UTEX 3055
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 850688..862127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UTEX3055_RS04390	-	851230..852456 (+)	1227	WP_011377529.1	cation:proton antiporter	-
UTEX3055_RS04395	-	852834..853112 (-)	279	WP_126147120.1	type II toxin-antitoxin system RelE/ParE family toxin	-
UTEX3055_RS04400	-	853109..853288 (-)	180	Protein_885	addiction module protein	-
UTEX3055_RS04405	-	853655..854302 (-)	648	WP_011243520.1	Coq4 family protein	-
UTEX3055_RS04410	-	854438..855526 (-)	1089	WP_011243521.1	potassium channel protein	-
UTEX3055_RS04415	comA	855688..857127 (+)	1440	WP_126147122.1	phospholipase D-like domain-containing protein	Machinery gene
UTEX3055_RS04420	ssb	857145..857507 (-)	363	WP_011377525.1	single-stranded DNA-binding protein	Machinery gene
UTEX3055_RS04425	-	857736..858737 (+)	1002	WP_039755477.1	rod shape-determining protein	-
UTEX3055_RS04430	mreC	858762..859511 (+)	750	WP_011243525.1	rod shape-determining protein MreC	-
UTEX3055_RS04435	mreD	859472..860155 (+)	684	WP_126147123.1	rod shape-determining protein MreD	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 52980.48 Da
• Isoelectric Point: 6.1226

>NTDB_id=281704 UTEX3055_RS04415 WP_126147122.1 855688..857127(+) (comA) [Synechococcus elongatus UTEX 3055]
MKSGVLALLLGLLTACQAPLAQIQSSGQGAADRWDANAPVQVAFNHNPDQRFTDSLGRDREGDDLEGQLLASLEQAQTSI
DVAVQEIQLPRLATALIQKHQAGIPVRIILENQYRQPWSQRLSGNLSDRERQRLENYRQMADRNGDGQLSPAEIAGGDAV
LMLERAGVPILDDTADGSKGSGLMHHKFALIDRRWVVTGSANWTASDFFGDPGRPASRGNANHLLWFRSPALAAIFQEEF
NLMWGDGPSKLPDSRFGLGKPLRSPKSVRIGNTRLLVQFSPTSPQLPWQESTNGTIARYLTQAQKQIDLALFVFSEQAIA
DVLEARSQQGTQVRLLIDPGFAYRPYSELLDVVGLALPDCDCRVESNNRPWSSPLTTAGAPRLTPGDTLHHKFAVIDRQR
VLTGSHNWSAAANLRNDETFLVIEDSSLADRFRAEFERLYADAFLGIPPALQRRFNEAKRRCGSRITPNSNQDLTETED

Nucleotide

• Length: 1440 bp

>NTDB_id=281704 UTEX3055_RS04415 WP_126147122.1 855688..857127(+) (comA) [Synechococcus elongatus UTEX 3055]
ATGAAGTCTGGAGTACTCGCCCTTTTGCTGGGGCTACTGACTGCCTGCCAAGCTCCACTGGCACAAATTCAGTCTTCGGG
GCAGGGCGCAGCCGATCGCTGGGATGCCAACGCTCCCGTGCAAGTCGCGTTCAATCACAACCCAGATCAGCGATTTACCG
ATAGCTTGGGCCGCGATCGCGAAGGTGATGATTTGGAAGGACAACTCCTCGCCAGCCTAGAGCAGGCTCAAACATCGATC
GATGTCGCGGTTCAGGAAATTCAGCTGCCCCGCTTAGCGACTGCTTTGATCCAAAAACACCAAGCTGGCATCCCTGTTCG
CATCATTTTGGAAAACCAGTATCGCCAACCTTGGAGTCAGCGACTGTCGGGCAACCTGAGCGATCGCGAGCGGCAGCGAC
TAGAGAACTACCGACAGATGGCCGATCGCAATGGTGATGGCCAACTCAGTCCCGCCGAAATTGCTGGCGGGGATGCCGTG
TTAATGCTGGAGCGCGCCGGTGTACCGATTCTGGACGACACCGCCGACGGCAGCAAAGGCAGCGGGTTGATGCACCACAA
ATTCGCACTCATCGATCGCCGCTGGGTTGTCACCGGCTCTGCCAACTGGACAGCCAGCGATTTCTTTGGCGATCCGGGCC
GACCTGCCAGTCGTGGCAATGCCAATCATCTGCTCTGGTTCCGCAGCCCAGCGCTCGCAGCGATTTTCCAAGAAGAATTC
AACCTGATGTGGGGCGATGGCCCCAGTAAATTGCCGGATAGCCGCTTTGGCCTTGGTAAGCCCTTGCGATCGCCTAAATC
GGTCCGTATTGGCAACACGCGCCTGCTGGTTCAGTTTTCGCCCACTAGTCCCCAGCTACCGTGGCAGGAAAGCACCAACG
GCACAATCGCCCGTTACCTCACCCAAGCTCAGAAGCAGATCGATCTAGCACTGTTTGTCTTTTCGGAACAAGCGATCGCC
GATGTTTTAGAAGCGCGATCGCAGCAAGGTACTCAAGTGCGACTGTTAATTGACCCTGGCTTTGCCTATCGTCCCTACAG
CGAACTGCTAGATGTGGTCGGCCTAGCGCTTCCCGATTGCGACTGCCGGGTTGAGTCAAACAATCGCCCTTGGAGTAGTC
CCCTCACAACAGCAGGAGCCCCACGACTGACGCCCGGCGACACGCTCCACCACAAATTTGCCGTGATTGATCGCCAGCGC
GTCCTGACCGGATCTCACAACTGGAGTGCTGCAGCCAACCTCAGAAATGACGAAACATTTTTAGTGATCGAGGACTCTAG
TTTGGCCGATCGCTTTCGGGCAGAATTTGAGCGACTCTACGCTGATGCCTTCTTAGGTATTCCGCCAGCCCTGCAGCGCC
GCTTCAATGAAGCGAAGCGACGCTGCGGTAGCCGAATCACTCCGAACAGCAATCAGGACTTAACCGAAACTGAGGATTGA

Domains

Predicted by InterProScan.

• PLD-like domain (PLDc_2) (298-439)

• PLD-like domain (PLDc_2) (70-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	46.313	90.605	0.42