Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | C7T90_RS23735 | Genome accession | NZ_CP028132 |
| Coordinates | 5125194..5125751 (+) | Length | 185 a.a. |
| NCBI ID | WP_023132294.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain YB01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5120194..5130751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7T90_RS23715 (C7T90_24225) | pilR | 5121470..5122807 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| C7T90_RS23720 (C7T90_24230) | thiO | 5122853..5123947 (-) | 1095 | WP_033943424.1 | glycine oxidase ThiO | - |
| C7T90_RS23725 (C7T90_24235) | - | 5124082..5124591 (+) | 510 | WP_003102595.1 | Tfp pilus assembly protein FimT/FimU | - |
| C7T90_RS23730 (C7T90_24240) | - | 5124697..5125203 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| C7T90_RS23735 (C7T90_24245) | pilV | 5125194..5125751 (+) | 558 | WP_023132294.1 | type 4a pilus minor pilin PilV | Machinery gene |
| C7T90_RS23740 (C7T90_24250) | pilW | 5125748..5126572 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| C7T90_RS23745 (C7T90_24255) | pilX | 5126569..5127156 (+) | 588 | WP_023090846.1 | type 4a pilus minor pilin PilX | - |
| C7T90_RS23750 (C7T90_24260) | pilY1 | 5127168..5130659 (+) | 3492 | WP_023132295.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20045.15 Da Isoelectric Point: 8.2255
>NTDB_id=281460 C7T90_RS23735 WP_023132294.1 5125194..5125751(+) (pilV) [Pseudomonas aeruginosa strain YB01]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGAAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGAAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=281460 C7T90_RS23735 WP_023132294.1 5125194..5125751(+) (pilV) [Pseudomonas aeruginosa strain YB01]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGGCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGGCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |