Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | C7J89_RS08160 | Genome accession | NZ_CP027846 |
| Coordinates | 1634721..1635695 (+) | Length | 324 a.a. |
| NCBI ID | WP_103295106.1 | Uniprot ID | - |
| Organism | Staphylococcus kloosii strain ATCC 43959 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1629721..1640695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7J89_RS08125 (C7J89_08120) | rpmG | 1630265..1630414 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| C7J89_RS08130 (C7J89_08125) | - | 1630542..1631078 (+) | 537 | WP_103295101.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| C7J89_RS08135 (C7J89_08130) | - | 1631093..1632535 (+) | 1443 | WP_103295102.1 | rhomboid family intramembrane serine protease | - |
| C7J89_RS08140 (C7J89_08135) | - | 1632536..1632736 (+) | 201 | WP_103295103.1 | YqgQ family protein | - |
| C7J89_RS08145 (C7J89_08140) | - | 1632737..1633723 (+) | 987 | WP_103295104.1 | glucokinase | - |
| C7J89_RS08150 (C7J89_08145) | - | 1633723..1634061 (+) | 339 | WP_061854584.1 | MTH1187 family thiamine-binding protein | - |
| C7J89_RS08155 (C7J89_08150) | - | 1634048..1634671 (+) | 624 | WP_103295105.1 | MBL fold metallo-hydrolase | - |
| C7J89_RS08160 (C7J89_08155) | comGA | 1634721..1635695 (+) | 975 | WP_103295106.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C7J89_RS08165 (C7J89_08160) | comGB | 1635667..1636734 (+) | 1068 | WP_233432426.1 | competence type IV pilus assembly protein ComGB | - |
| C7J89_RS08170 (C7J89_08165) | comGC | 1636748..1637056 (+) | 309 | WP_103295107.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C7J89_RS08175 (C7J89_08170) | comGD | 1637037..1637477 (+) | 441 | WP_233432455.1 | competence type IV pilus minor pilin ComGD | - |
| C7J89_RS08180 (C7J89_08175) | - | 1637464..1637751 (+) | 288 | WP_103295109.1 | hypothetical protein | - |
| C7J89_RS08185 (C7J89_08180) | comGF | 1637735..1638157 (+) | 423 | WP_267895088.1 | competence type IV pilus minor pilin ComGF | - |
| C7J89_RS08195 (C7J89_08190) | - | 1638325..1638837 (+) | 513 | WP_103295711.1 | shikimate kinase | - |
| C7J89_RS08200 (C7J89_08195) | gcvT | 1639003..1640094 (+) | 1092 | WP_103295710.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37151.82 Da Isoelectric Point: 7.4476
>NTDB_id=280888 C7J89_RS08160 WP_103295106.1 1634721..1635695(+) (comGA) [Staphylococcus kloosii strain ATCC 43959]
MKLLFNELINKAINQNSSDIHFIPTDNNVLIKLRVQDDLIQHQAITKSLYLKLLTFMKYQANLDVSTSHIAQSGRYVYKY
KELYYLRISTLPLSLGLESCVIRIVPHYFNEQQQPLNLPYLYDFMNKKQGLLLFTGPTGSGKSTSMYNMSMYAKEQLNLN
VITIEDPVERIINGITQVSVNEKAGINYQNTFKAILRCDPDVILIGEIRNQSIAKEVLHASLSGHLVLTTMHANNCKGAL
LRLLEMGVTQQELSQSVLCITNQRLVTSNDKERFLIAEHMNNNDINYFFEHNYKLPANFQSLPKELKSLSEEGVICEDTY
QKYI
MKLLFNELINKAINQNSSDIHFIPTDNNVLIKLRVQDDLIQHQAITKSLYLKLLTFMKYQANLDVSTSHIAQSGRYVYKY
KELYYLRISTLPLSLGLESCVIRIVPHYFNEQQQPLNLPYLYDFMNKKQGLLLFTGPTGSGKSTSMYNMSMYAKEQLNLN
VITIEDPVERIINGITQVSVNEKAGINYQNTFKAILRCDPDVILIGEIRNQSIAKEVLHASLSGHLVLTTMHANNCKGAL
LRLLEMGVTQQELSQSVLCITNQRLVTSNDKERFLIAEHMNNNDINYFFEHNYKLPANFQSLPKELKSLSEEGVICEDTY
QKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=280888 C7J89_RS08160 WP_103295106.1 1634721..1635695(+) (comGA) [Staphylococcus kloosii strain ATCC 43959]
TTGAAACTATTGTTCAATGAATTAATTAATAAAGCTATTAACCAAAATAGTTCTGACATTCATTTTATTCCTACTGATAA
TAATGTGTTAATTAAATTACGAGTACAAGATGATTTAATTCAACATCAAGCTATTACTAAAAGTTTATATTTAAAACTCT
TAACTTTTATGAAATATCAAGCAAATTTAGATGTATCGACGAGTCACATAGCTCAAAGTGGTAGGTATGTATACAAATAT
AAAGAGCTATATTATCTCCGAATTTCAACATTACCGCTATCACTTGGTTTAGAAAGTTGTGTTATTCGAATTGTGCCACA
CTACTTTAACGAACAGCAACAACCGTTAAATTTGCCTTATTTATATGATTTTATGAATAAAAAGCAAGGCTTGCTACTAT
TCACTGGACCAACAGGTTCTGGGAAAAGCACTAGTATGTATAATATGTCGATGTATGCTAAAGAGCAACTTAATTTAAAT
GTTATTACAATAGAGGACCCTGTTGAACGTATTATTAATGGTATAACTCAAGTTTCAGTAAATGAAAAAGCTGGTATTAA
TTATCAAAATACGTTTAAAGCTATATTACGCTGTGATCCTGATGTAATTTTGATAGGAGAGATTAGAAACCAATCAATCG
CAAAAGAAGTCTTACATGCAAGTTTAAGTGGCCATTTAGTTTTAACAACGATGCATGCGAATAATTGTAAAGGAGCATTA
TTACGATTGTTAGAAATGGGTGTCACGCAACAAGAATTATCACAATCAGTACTCTGCATTACAAATCAAAGACTTGTTAC
TTCTAACGACAAAGAGAGATTTTTAATAGCCGAGCATATGAATAATAATGATATTAATTATTTCTTTGAACATAACTATA
AGTTGCCCGCAAATTTTCAAAGCCTACCAAAGGAATTAAAATCTTTGTCAGAAGAGGGGGTAATTTGTGAGGATACTTAC
CAAAAATATATTTAG
TTGAAACTATTGTTCAATGAATTAATTAATAAAGCTATTAACCAAAATAGTTCTGACATTCATTTTATTCCTACTGATAA
TAATGTGTTAATTAAATTACGAGTACAAGATGATTTAATTCAACATCAAGCTATTACTAAAAGTTTATATTTAAAACTCT
TAACTTTTATGAAATATCAAGCAAATTTAGATGTATCGACGAGTCACATAGCTCAAAGTGGTAGGTATGTATACAAATAT
AAAGAGCTATATTATCTCCGAATTTCAACATTACCGCTATCACTTGGTTTAGAAAGTTGTGTTATTCGAATTGTGCCACA
CTACTTTAACGAACAGCAACAACCGTTAAATTTGCCTTATTTATATGATTTTATGAATAAAAAGCAAGGCTTGCTACTAT
TCACTGGACCAACAGGTTCTGGGAAAAGCACTAGTATGTATAATATGTCGATGTATGCTAAAGAGCAACTTAATTTAAAT
GTTATTACAATAGAGGACCCTGTTGAACGTATTATTAATGGTATAACTCAAGTTTCAGTAAATGAAAAAGCTGGTATTAA
TTATCAAAATACGTTTAAAGCTATATTACGCTGTGATCCTGATGTAATTTTGATAGGAGAGATTAGAAACCAATCAATCG
CAAAAGAAGTCTTACATGCAAGTTTAAGTGGCCATTTAGTTTTAACAACGATGCATGCGAATAATTGTAAAGGAGCATTA
TTACGATTGTTAGAAATGGGTGTCACGCAACAAGAATTATCACAATCAGTACTCTGCATTACAAATCAAAGACTTGTTAC
TTCTAACGACAAAGAGAGATTTTTAATAGCCGAGCATATGAATAATAATGATATTAATTATTTCTTTGAACATAACTATA
AGTTGCCCGCAAATTTTCAAAGCCTACCAAAGGAATTAAAATCTTTGTCAGAAGAGGGGGTAATTTGTGAGGATACTTAC
CAAAAATATATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.494 |
100 |
0.605 |
| comGA | Staphylococcus aureus N315 |
60.494 |
100 |
0.605 |