Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   C7J89_RS06060 Genome accession   NZ_CP027846
Coordinates   1239994..1241037 (+) Length   347 a.a.
NCBI ID   WP_103295995.1    Uniprot ID   A0A921H2U2
Organism   Staphylococcus kloosii strain ATCC 43959     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1234994..1246037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7J89_RS06035 (C7J89_06030) - 1236106..1236822 (+) 717 WP_103295268.1 type 1 glutamine amidotransferase -
  C7J89_RS06040 (C7J89_06035) - 1236889..1237875 (-) 987 WP_106884396.1 aromatic acid exporter family protein -
  C7J89_RS06045 (C7J89_06040) map 1238034..1238786 (+) 753 WP_061855633.1 type I methionyl aminopeptidase -
  C7J89_RS06050 (C7J89_06045) - 1238893..1239279 (+) 387 WP_061855634.1 hypothetical protein -
  C7J89_RS06055 (C7J89_06050) liaF 1239296..1239997 (+) 702 WP_103295994.1 cell wall-active antibiotics response protein LiaF -
  C7J89_RS06060 (C7J89_06055) vraS 1239994..1241037 (+) 1044 WP_103295995.1 sensor histidine kinase Regulator
  C7J89_RS06065 (C7J89_06060) vraR 1241027..1241656 (+) 630 WP_061855637.1 response regulator transcription factor Regulator
  C7J89_RS06070 (C7J89_06065) - 1241729..1242814 (-) 1086 Protein_1183 YihY/virulence factor BrkB family protein -
  C7J89_RS06075 (C7J89_06070) - 1243069..1243350 (-) 282 WP_061855639.1 hypothetical protein -
  C7J89_RS06080 (C7J89_06075) - 1243357..1243821 (-) 465 WP_103295996.1 low molecular weight protein-tyrosine-phosphatase -
  C7J89_RS06085 (C7J89_06080) - 1243953..1244156 (+) 204 WP_048793238.1 DUF1128 family protein -
  C7J89_RS06090 (C7J89_06085) - 1244169..1245407 (+) 1239 WP_103295997.1 aminopeptidase -
  C7J89_RS06095 (C7J89_06090) - 1245438..1245959 (+) 522 WP_061855642.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39935.20 Da        Isoelectric Point: 5.6132

>NTDB_id=280878 C7J89_RS06060 WP_103295995.1 1239994..1241037(+) (vraS) [Staphylococcus kloosii strain ATCC 43959]
MNHYIRAIGSMLILVYSTLIAFFFIDKVFVNIMYFQGMFYTQIFGIPVFLFLNLLIIFLCIIVGSVLAYKINQQNHWLQR
QIERSIEGQTVGVNDQDIELYNETIELYHTLVPLNQEVHKLRMKTQNLTNESYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVTDLQKKVPMKVVHDI
EDFSVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNQADYLLLRVQDNGIGFNVDENTEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLDKEELDAN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=280878 C7J89_RS06060 WP_103295995.1 1239994..1241037(+) (vraS) [Staphylococcus kloosii strain ATCC 43959]
ATGAATCACTACATAAGAGCTATAGGTTCAATGTTGATCTTAGTATACAGTACGCTAATTGCATTTTTTTTTATAGACAA
AGTTTTTGTTAATATAATGTACTTTCAAGGTATGTTTTATACGCAAATTTTTGGTATACCAGTGTTTCTATTTTTAAATT
TATTAATTATATTTTTGTGTATCATAGTTGGTTCGGTATTAGCATATAAGATTAATCAACAGAACCATTGGCTACAACGC
CAAATAGAACGCTCTATCGAAGGACAAACGGTTGGTGTGAATGATCAAGACATCGAACTGTACAATGAAACTATTGAGTT
ATACCATACACTTGTACCGTTAAATCAAGAAGTACATAAACTGAGAATGAAAACGCAAAATTTAACGAATGAGTCATATA
ATATGAATGACGTAAAAGTTAAAAAAATCATTGAAGATGAACGTCAAAGACTTGCAAGAGAACTACATGATTCAGTGAGC
CAGCAATTATTTGCTGCTAGTATGATGTTATCCGCAATTAAGGAAACCGAACTCGCACCACCATTAGATCAACAAATACC
AACTTTAGAAAAAATGGTGCAAGATTCTCAATTAGAAATGAGAGCTTTACTCTTACATTTAAGACCTATTGGCCTAAAAG
ATAAGTCATTAGGTGAAGGTATTAAAGACTTAGTAACTGATTTACAGAAAAAAGTACCGATGAAAGTCGTACATGATATT
GAGGACTTTTCAGTACCAAAAGGTATAGAAGACCATCTATTTAGAATCACACAAGAAGCGATTTCTAATACATTACGTCA
TTCAAAAGGAACGAAAGTTACAATAGAGTTGTTTAATCAAGCTGATTACTTGTTACTACGTGTGCAAGATAATGGTATAG
GTTTTAATGTAGATGAAAATACTGAACAAAGTTATGGTTTAAAAAATATGCGTGAACGTGCATTAGAAATAGGTGCAACA
TTCCATATTGTTTCTCTACCCGATTCAGGTACAAGAATAGAAGTGAAAGCGCCATTAGATAAGGAGGAATTGGATGCCAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.047

98.847

0.87


Multiple sequence alignment