Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C7K40_RS07150 Genome accession   NZ_CP027771
Coordinates   1419204..1420013 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain DMG1800716     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1414204..1425013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7K40_RS07140 (C7K40_07135) smc 1414528..1418067 (-) 3540 WP_063629694.1 chromosome segregation protein SMC -
  C7K40_RS07145 (C7K40_07140) rnc 1418068..1418760 (-) 693 WP_011284596.1 ribonuclease III -
  C7K40_RS07150 (C7K40_07145) vicX 1419204..1420013 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  C7K40_RS07155 (C7K40_07150) vicK 1420017..1421369 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  C7K40_RS07160 (C7K40_07155) vicR 1421362..1422072 (-) 711 WP_002985645.1 response regulator YycF Regulator
  C7K40_RS07165 (C7K40_07160) - 1422234..1423268 (-) 1035 WP_172456391.1 DUF3114 domain-containing protein -
  C7K40_RS07170 (C7K40_07165) - 1423324..1424571 (-) 1248 WP_063629692.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=280459 C7K40_RS07150 WP_002985641.1 1419204..1420013(-) (vicX) [Streptococcus pyogenes strain DMG1800716]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=280459 C7K40_RS07150 WP_002985641.1 1419204..1420013(-) (vicX) [Streptococcus pyogenes strain DMG1800716]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment