Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   C7J90_RS11730 Genome accession   NZ_CP027770
Coordinates   2452717..2453433 (+) Length   238 a.a.
NCBI ID   WP_103207458.1    Uniprot ID   A0AAQ0HQG5
Organism   Staphylococcus felis strain ATCC 49168     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2447717..2458433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7J90_RS11705 (C7J90_11705) - 2449132..2449938 (+) 807 WP_103209745.1 carbon-nitrogen family hydrolase -
  C7J90_RS11710 (C7J90_11710) - 2450187..2450300 (-) 114 WP_194295051.1 delta-lysin family phenol-soluble modulin -
  C7J90_RS11715 (C7J90_11715) - 2450663..2451229 (+) 567 WP_103207462.1 accessory gene regulator AgrB -
  C7J90_RS11720 (C7J90_11720) - 2451232..2451369 (+) 138 WP_103207460.1 cyclic lactone autoinducer peptide -
  C7J90_RS11725 (C7J90_11725) - 2451809..2452702 (+) 894 WP_232618816.1 ATP-binding protein -
  C7J90_RS11730 (C7J90_11730) agrA 2452717..2453433 (+) 717 WP_103207458.1 LytTR family DNA-binding domain-containing protein Regulator
  C7J90_RS11735 (C7J90_11735) - 2453522..2455006 (-) 1485 WP_103207456.1 sucrose-6-phosphate hydrolase -
  C7J90_RS11740 (C7J90_11740) - 2455231..2455455 (-) 225 WP_103207455.1 sulfurtransferase TusA family protein -
  C7J90_RS11745 (C7J90_11745) - 2455473..2456549 (-) 1077 WP_103207453.1 YeeE/YedE family protein -
  C7J90_RS11750 (C7J90_11750) - 2457215..2457859 (-) 645 WP_103207451.1 redox-sensing transcriptional repressor Rex -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27928.86 Da        Isoelectric Point: 4.8715

>NTDB_id=280421 C7J90_RS11730 WP_103207458.1 2452717..2453433(+) (agrA) [Staphylococcus felis strain ATCC 49168]
MKILICEDDPKQRERMQQIIENYIMIEEKPMEVEIATNDPYEILEAAKNMSDIGCYFLDIQLESDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAALDFIFKDDPDELQTRIIDCLETALKRLDLLTKDNTIETLELKRGSSSVYVNYDEVM
FFESSPKSHRLIAHLDNRQIEFYGNLKELAQLDDRFVRCHNSFVLNRHNISHVDSKERIAYFKNDEYCYVSVRNLKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=280421 C7J90_RS11730 WP_103207458.1 2452717..2453433(+) (agrA) [Staphylococcus felis strain ATCC 49168]
ATGAAAATACTGATTTGCGAAGATGATCCAAAACAACGTGAACGAATGCAACAAATTATTGAGAATTATATTATGATTGA
AGAAAAACCAATGGAAGTTGAAATTGCAACAAATGATCCATATGAGATTTTAGAAGCTGCTAAAAATATGTCAGACATTG
GCTGCTATTTTTTAGATATTCAACTTGAATCTGATATCAATGGTATTAAGTTAGGTAGTGAAATTAGAAAACATGATCCT
GTTGGAAATATTATTTTTGTAACAAGTCACAGTGAGTTAACATATCTCACATTTGTTTATAAAGTAGCCGCACTTGACTT
TATTTTTAAAGATGATCCTGACGAATTGCAAACGCGTATTATTGATTGTTTAGAAACTGCATTAAAACGTTTAGACTTAT
TAACAAAAGACAATACCATTGAAACATTAGAGCTAAAGCGCGGTAGTAGTTCTGTTTATGTCAATTATGATGAAGTGATG
TTTTTCGAGTCTTCTCCAAAGTCTCACCGTTTAATCGCACATTTGGACAACCGTCAAATTGAATTTTATGGTAATCTCAA
GGAACTTGCACAACTTGATGACCGCTTCGTCCGTTGTCACAATAGTTTTGTTTTAAATCGACATAATATTTCACATGTTG
ACTCTAAAGAACGCATCGCTTATTTTAAAAACGACGAGTATTGTTATGTCTCTGTTCGTAATCTCAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

82.773

100

0.828
  comE/comE1 Streptococcus equinus JB1

35.802

100

0.366

Multiple sequence alignment