Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   C7J90_RS11380 Genome accession   NZ_CP027770
Coordinates   2381988..2383031 (-) Length   347 a.a.
NCBI ID   WP_103207603.1    Uniprot ID   A0A2K3ZIM8
Organism   Staphylococcus felis strain ATCC 49168     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2376988..2388031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7J90_RS11350 (C7J90_11350) - 2377996..2378205 (-) 210 WP_262633092.1 DUF1128 domain-containing protein -
  C7J90_RS11355 (C7J90_11355) - 2378340..2378804 (+) 465 WP_103207612.1 low molecular weight protein-tyrosine-phosphatase -
  C7J90_RS11360 (C7J90_11360) - 2378806..2379093 (+) 288 WP_103207611.1 YtxH domain-containing protein -
  C7J90_RS11365 (C7J90_11365) - 2379456..2380679 (+) 1224 WP_103207609.1 YihY/virulence factor BrkB family protein -
  C7J90_RS11370 (C7J90_11370) - 2380710..2381282 (+) 573 WP_103207607.1 carbonic anhydrase -
  C7J90_RS11375 (C7J90_11375) vraR 2381369..2381998 (-) 630 WP_103207605.1 response regulator transcription factor Regulator
  C7J90_RS11380 (C7J90_11380) vraS 2381988..2383031 (-) 1044 WP_103207603.1 sensor histidine kinase Regulator
  C7J90_RS11385 (C7J90_11385) liaF 2383028..2383729 (-) 702 WP_103207601.1 cell wall-active antibiotics response protein LiaF -
  C7J90_RS11390 (C7J90_11390) - 2383742..2384131 (-) 390 WP_103207599.1 hypothetical protein -
  C7J90_RS11395 (C7J90_11395) map 2384226..2384987 (-) 762 WP_103207598.1 type I methionyl aminopeptidase -
  C7J90_RS11400 (C7J90_11400) - 2385078..2386082 (+) 1005 WP_174688362.1 aromatic acid exporter family protein -
  C7J90_RS11405 (C7J90_11405) - 2386162..2386887 (-) 726 WP_103207595.1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40184.49 Da        Isoelectric Point: 5.1680

>NTDB_id=280420 C7J90_RS11380 WP_103207603.1 2381988..2383031(-) (vraS) [Staphylococcus felis strain ATCC 49168]
MNHYVRTIGSMLILVYSMFTAFFFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNLIVIFLCIIVGSVIAYKINQQNDWLQQ
QIERAFEGETVGVNDQQLELYNETLEIYRSLVPLNQELHKMRIKTQNLTNESYNLNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETNLNPPLDQQIPTLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIRSLVTELQKKVPMKVIQEI
DEFDVPKGIEDHLFRITQEAISNTLRHAKGEQVTVELLKREDYLLLRIQDDGIGFNVDDKIEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEESHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=280420 C7J90_RS11380 WP_103207603.1 2381988..2383031(-) (vraS) [Staphylococcus felis strain ATCC 49168]
ATGAATCACTATGTCAGAACGATTGGATCAATGCTCATACTAGTTTACAGTATGTTTACAGCTTTCTTTTTTATCGATAA
AGTTTTTGTGAATATCATATTTTTTCAAGGTATGTTTTACACTCAAATCTTCGGTATTCCTGTATTTTTATTTCTTAACT
TAATTGTCATTTTTTTGTGTATTATTGTGGGTAGTGTAATAGCGTATAAGATTAATCAACAAAATGATTGGTTACAACAA
CAGATTGAGCGTGCATTTGAAGGTGAAACAGTCGGTGTTAACGATCAGCAACTAGAGCTGTATAATGAAACATTAGAGAT
TTACCGTTCATTGGTACCGCTCAATCAAGAATTACATAAAATGCGAATTAAAACTCAAAATTTGACAAATGAATCTTATA
ACTTAAATGATATAAAAGTAAAAAAAATAATTGAAGATGAACGTCAACGGTTAGCTAGAGAGCTTCACGATAGCGTTTCG
CAGCAATTGTTTGCAGCTAGTATGATGTTATCAGCTATTAAAGAAACAAACTTAAATCCACCACTTGATCAACAGATACC
AACACTTGAAAAAATGATTCAAGACTCACAACTTGAAATGAGAGCATTATTATTACACCTACGTCCAATAGGTTTGAAGG
ATAAATCATTAGGTGAAGGCATACGATCGTTAGTGACTGAATTACAAAAGAAAGTACCTATGAAAGTTATACAAGAAATT
GATGAGTTTGATGTTCCAAAGGGTATAGAAGATCACTTATTTAGAATCACACAAGAGGCAATCTCCAATACGTTACGTCA
TGCTAAGGGTGAACAAGTGACGGTTGAATTGTTAAAAAGAGAAGACTATTTATTATTGCGTATTCAAGATGATGGTATCG
GCTTTAATGTGGACGATAAAATTGAACAAAGTTATGGTTTGAAAAATATGCGTGAAAGAGCAATTGAAATTGGTGCAACT
TTTCATATCGTCTCTTTGCCTGATGCAGGAACACGTATCGAGGTTAAAGCACCATTAGAAAAGGAGGAAAGTCATGACAA
TTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K3ZIM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

82.997

100

0.83


Multiple sequence alignment