Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4K01_RS28340 Genome accession   NZ_CP027756
Coordinates   6111757..6112164 (-) Length   135 a.a.
NCBI ID   WP_046069925.1    Uniprot ID   A0A0Q8CWG6
Organism   Pseudomonas synxantha strain R6-28-08     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6106757..6117164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4K01_RS28325 (C4K01_5703) - 6108761..6110812 (-) 2052 WP_057022843.1 methyl-accepting chemotaxis protein -
  C4K01_RS28330 (C4K01_5704) - 6110809..6111333 (-) 525 WP_057022842.1 chemotaxis protein CheW -
  C4K01_RS28335 (C4K01_5705) pilH 6111345..6111710 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4K01_RS28340 (C4K01_5706) pilG 6111757..6112164 (-) 408 WP_046069925.1 twitching motility response regulator PilG Regulator
  C4K01_RS28345 (C4K01_5707) gshB 6112403..6113356 (+) 954 WP_046069926.1 glutathione synthase -
  C4K01_RS28350 (C4K01_5708) - 6113434..6114339 (+) 906 WP_057022841.1 energy transducer TonB -
  C4K01_RS28355 (C4K01_5709) - 6114390..6114959 (+) 570 WP_057022840.1 YqgE/AlgH family protein -
  C4K01_RS28360 (C4K01_5710) ruvX 6114959..6115396 (+) 438 WP_057022839.1 Holliday junction resolvase RuvX -
  C4K01_RS28365 (C4K01_5711) pyrR 6115529..6116035 (+) 507 WP_057022838.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  C4K01_RS28370 (C4K01_5712) - 6116060..6117064 (+) 1005 WP_057022837.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.57 Da        Isoelectric Point: 7.3843

>NTDB_id=280181 C4K01_RS28340 WP_046069925.1 6111757..6112164(-) (pilG) [Pseudomonas synxantha strain R6-28-08]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGVIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=280181 C4K01_RS28340 WP_046069925.1 6111757..6112164(-) (pilG) [Pseudomonas synxantha strain R6-28-08]
ATGGAACAGCATTCCAACGCCTTGAGGGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTAATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGTGATAAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q8CWG6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652

Multiple sequence alignment