Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   D9C08_RS03605 Genome accession   NZ_CP032872
Coordinates   687306..688133 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 682306..693133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS03580 (D9C08_03580) efpO 683369..684811 (+) 1443 WP_021479734.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  D9C08_RS03585 (D9C08_03585) tmk 684808..685446 (+) 639 WP_069322312.1 dTMP kinase -
  D9C08_RS03590 (D9C08_03590) darA 685520..685849 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  D9C08_RS03595 (D9C08_03595) yaaR 685862..686302 (+) 441 WP_009966249.1 YaaR family protein -
  D9C08_RS03600 (D9C08_03600) holB 686314..687303 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  D9C08_RS03605 (D9C08_03605) yaaT 687306..688133 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  D9C08_RS03610 (D9C08_03610) yabA 688148..688507 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  D9C08_RS03615 (D9C08_03615) trmNF 688566..689309 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  D9C08_RS03620 (D9C08_03620) yazA 689296..689595 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  D9C08_RS03625 (D9C08_03625) rsmI 689570..690448 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  D9C08_RS03630 (D9C08_03630) abrB 690497..690787 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=280180 D9C08_RS03605 WP_003226767.1 687306..688133(+) (yaaT) [Bacillus subtilis subsp. subtilis strain 2KL1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=280180 D9C08_RS03605 WP_003226767.1 687306..688133(+) (yaaT) [Bacillus subtilis subsp. subtilis strain 2KL1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996