Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   D9C20_RS07660 Genome accession   NZ_CP032867
Coordinates   1421573..1421947 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain N4-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1416573..1426947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C20_RS07635 (D9C20_07635) - 1416738..1416899 (-) 162 WP_003227632.1 hypothetical protein -
  D9C20_RS07640 (D9C20_07640) glpX 1417114..1418079 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  D9C20_RS07645 (D9C20_07645) murAB 1418110..1419399 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D9C20_RS22635 - 1419640..1419777 (-) 138 WP_014481198.1 hypothetical protein -
  D9C20_RS07650 (D9C20_07650) fsa 1419777..1420415 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D9C20_RS07655 (D9C20_07655) fbaA 1420535..1421392 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D9C20_RS07660 (D9C20_07660) letA 1421573..1421947 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D9C20_RS07665 (D9C20_07665) ywjG 1422113..1422634 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  D9C20_RS07670 (D9C20_07670) pyrG 1422716..1424323 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D9C20_RS07675 (D9C20_07675) rpoE 1424565..1425071 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  D9C20_RS07680 (D9C20_07680) acdA 1425254..1426393 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=280065 D9C20_RS07660 WP_003227621.1 1421573..1421947(-) (letA) [Bacillus subtilis subsp. subtilis strain N4-2]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=280065 D9C20_RS07660 WP_003227621.1 1421573..1421947(-) (letA) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363