Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   D9C17_RS10155 Genome accession   NZ_CP032863
Coordinates   1849953..1850327 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1844953..1855327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS10130 (D9C17_10130) - 1845118..1845279 (-) 162 WP_003227632.1 hypothetical protein -
  D9C17_RS10135 (D9C17_10135) glpX 1845494..1846459 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  D9C17_RS10140 (D9C17_10140) murAB 1846490..1847779 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D9C17_RS22665 - 1848020..1848157 (-) 138 WP_014481198.1 hypothetical protein -
  D9C17_RS10145 (D9C17_10145) fsa 1848157..1848795 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D9C17_RS10150 (D9C17_10150) fbaA 1848915..1849772 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D9C17_RS10155 (D9C17_10155) letA 1849953..1850327 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D9C17_RS10160 (D9C17_10160) ywjG 1850493..1851014 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  D9C17_RS10165 (D9C17_10165) pyrG 1851096..1852703 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D9C17_RS10170 (D9C17_10170) rpoE 1852945..1853451 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  D9C17_RS10175 (D9C17_10175) acdA 1853634..1854773 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=279773 D9C17_RS10155 WP_003227621.1 1849953..1850327(-) (letA) [Bacillus subtilis subsp. subtilis strain N2-2]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=279773 D9C17_RS10155 WP_003227621.1 1849953..1850327(-) (letA) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363